Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS08730 and HMPREF1058_RS08725 are separated by 21 nucleotidesHMPREF1058_RS08725 and HMPREF1058_RS08715 are separated by 621 nucleotidesHMPREF1058_RS08715 and HMPREF1058_RS08710 are separated by 78 nucleotidesHMPREF1058_RS08710 and HMPREF1058_RS08705 are separated by 313 nucleotides HMPREF1058_RS08730: HMPREF1058_RS08730 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 1,054,585 to 1,056,498 _RS08730 HMPREF1058_RS08725: HMPREF1058_RS08725 - SusC/RagA family TonB-linked outer membrane protein, at 1,056,520 to 1,059,921 _RS08725 HMPREF1058_RS08715: HMPREF1058_RS08715 - hypothetical protein, at 1,060,543 to 1,062,249 _RS08715 HMPREF1058_RS08710: HMPREF1058_RS08710 - HU family DNA-binding protein, at 1,062,328 to 1,062,966 _RS08710 HMPREF1058_RS08705: HMPREF1058_RS08705 - DUF3874 domain-containing protein, at 1,063,280 to 1,064,431 _RS08705
Group Condition HMPREF1058_RS08730 HMPREF1058_RS08725 HMPREF1058_RS08715 HMPREF1058_RS08710 HMPREF1058_RS08705
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -0.6 -0.8 -0.3 -0.3 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.2 -0.7 -0.1 -0.6 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.6 -0.6 -0.2 -0.3 -0.3
carbon source Dextran 5 mg/ml (C) -0.4 -0.4 -0.5 -0.6 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 -0.2 -0.0 -0.3 -1.0 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.2 -0.7 -0.1 -0.2 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.7 -0.8 -0.0 +0.0 +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -0.5 -0.5 -0.1 +0.2 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3 -0.4 -0.6 -0.5 +0.4 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse8; day2 -0.5 -0.6 -0.3 +0.2 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -0.6 -0.5 -0.3 +0.6 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.5 -0.6 -0.0 +0.3 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.5 -0.6 -0.3 +0.6 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 -0.4 -0.5 +0.1 +0.4 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -0.5 -0.5 -0.0 +0.6 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.6 -0.7 -0.0 +0.3 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 -0.3 -0.4 -0.2 +0.5 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -0.5 -0.5 -0.4 +0.8 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.4 -0.7 -0.1 +0.3 +0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -0.3 -0.2 -0.1 +0.6 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -0.3 -0.5 -0.3 +0.6 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -0.3 -0.5 -0.3 +0.8 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 -0.4 -0.5 -0.1 +0.7 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -0.3 -0.5 -0.5 +1.0 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -0.3 -0.4 -0.3 +1.0 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -0.6 -0.3 -0.1 +0.7 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -0.3 -0.4 -0.1 +0.6 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -0.6 -0.3 -0.1 +0.8 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 -0.3 -0.4 -0.3 +0.8 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.2 -0.2 -0.0 +1.2 -0.4
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HMPREF1058_RS08730
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HMPREF1058_RS08705
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