Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS07795 and HMPREF1058_RS07790 are separated by 9 nucleotidesHMPREF1058_RS07790 and HMPREF1058_RS07785 are separated by 1 nucleotidesHMPREF1058_RS07785 and HMPREF1058_RS07780 are separated by 15 nucleotidesHMPREF1058_RS07780 and HMPREF1058_RS07775 are separated by 4 nucleotides HMPREF1058_RS07795: HMPREF1058_RS07795 - 6-bladed beta-propeller, at 128,121 to 129,128 _RS07795 HMPREF1058_RS07790: HMPREF1058_RS07790 - hypothetical protein, at 129,138 to 131,063 _RS07790 HMPREF1058_RS07785: HMPREF1058_RS07785 - signal peptidase I, at 131,065 to 131,967 _RS07785 HMPREF1058_RS07780: HMPREF1058_RS07780 - hypothetical protein, at 131,983 to 133,890 _RS07780 HMPREF1058_RS07775: HMPREF1058_RS07775 - hypothetical protein, at 133,895 to 135,919 _RS07775
Group Condition HMPREF1058_RS07795 HMPREF1058_RS07790 HMPREF1058_RS07785 HMPREF1058_RS07780 HMPREF1058_RS07775
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -1.1 -0.8 -1.8 +0.0 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -1.1 -0.8 -1.5 +0.0 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -1.1 -0.4 -2.0 -0.2 +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -1.2 -0.9 -1.6 +0.1 +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -1.2 -0.7 -1.9 +0.1 +0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -1.1 -0.6 -1.9 -0.0 +0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 -0.7 -0.6 -1.6 +0.0 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.8 -0.6 -1.9 +0.3 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -1.1 -0.5 -1.2 -0.2 +0.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day6 -0.5 -0.5 -1.2 -0.3 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -0.7 -0.7 -1.4 +0.2 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -0.7 -0.5 -1.2 -0.1 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.4 -0.3 -1.0 -0.1 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 -0.9 -0.5 -1.0 -0.1 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -0.9 -0.5 -1.4 +0.2 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.5 -0.2 -0.7 -0.4 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.4 -0.4 -1.0 -0.1 -0.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day5 -0.6 -0.4 -0.9 -0.4 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 -0.7 -0.4 -1.2 -0.2 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.3 -0.5 -0.6 -0.4 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3 -0.5 -0.5 -1.1 +0.0 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -0.8 -0.4 -0.6 +0.0 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day5 -0.4 -0.4 -0.8 -0.3 -0.3
carbon source D-Glucose 5 mg/ml (C) -0.2 -0.7 -0.7 -0.5 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.4 -0.3 -0.7 -0.2 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.3 -0.3 -0.8 -0.3 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.4 -0.2 -0.6 -0.1 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.3 -0.3 -0.5 -0.1 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -0.4 -0.1 -0.6 -0.0 -1.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day4 -0.5 -0.4 -0.6 -0.3 -0.2
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HMPREF1058_RS07795
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HMPREF1058_RS07775
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