Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS06315 and HMPREF1058_RS06310 are separated by 32 nucleotidesHMPREF1058_RS06310 and HMPREF1058_RS06305 are separated by 293 nucleotidesHMPREF1058_RS06305 and HMPREF1058_RS06300 are separated by 140 nucleotidesHMPREF1058_RS06300 and HMPREF1058_RS06295 are separated by 263 nucleotides HMPREF1058_RS06315: HMPREF1058_RS06315 - hypothetical protein, at 507,378 to 508,274 _RS06315 HMPREF1058_RS06310: HMPREF1058_RS06310 - UDP-glucose 4-epimerase GalE, at 508,307 to 509,341 _RS06310 HMPREF1058_RS06305: HMPREF1058_RS06305 - LruC domain-containing protein, at 509,635 to 511,512 _RS06305 HMPREF1058_RS06300: HMPREF1058_RS06300 - YitT family protein, at 511,653 to 512,543 _RS06300 HMPREF1058_RS06295: HMPREF1058_RS06295 - aspartate ammonia-lyase, at 512,807 to 514,240 _RS06295
Group Condition HMPREF1058_RS06315 HMPREF1058_RS06310 HMPREF1058_RS06305 HMPREF1058_RS06300 HMPREF1058_RS06295
carbon source D-Galactose 20 mM (C) -1.0 -4.4 +0.2 -1.4 -1.3
carbon source D-Galactose 20 mM (C) -1.3 -4.4 +0.2 -0.5 -1.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -0.6 -4.9 +0.1 -1.4 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day2 -0.6 -4.7 +0.1 -1.5 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.5 -3.5 +0.1 -2.8 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day3 -0.6 -4.8 +0.0 -1.2 -0.4
carbon source D-Galactose 20 mM (C) -0.8 -4.4 +0.2 -1.4 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day1 -0.6 -4.8 +0.1 -1.1 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day3 -0.5 -4.9 -0.1 -0.9 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -0.6 -3.6 -0.0 -2.4 -0.1
carbon source Arabinan from sugar beet 5mg/ml (C) -0.5 -3.7 -0.0 -0.6 -1.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day2 -0.5 -5.0 -0.0 -0.8 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 -0.5 -4.5 +0.1 -1.2 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day3 -0.4 -4.8 -0.0 -0.9 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day3 -0.5 -5.0 +0.1 -0.8 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.4 -4.9 +0.1 -1.0 -0.2
carbon source Beta-Lactose 20 mM (C) -0.4 -4.9 -0.0 -0.3 -0.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day2 -0.4 -5.0 -0.0 -0.8 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day2 -0.2 -5.0 -0.1 -0.7 -0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day4 -0.3 -4.6 -0.1 -0.8 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day1 -0.4 -4.9 +0.0 -0.6 -0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day4 -0.4 -4.7 -0.0 -0.8 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day3 -0.4 -5.0 -0.0 -0.6 -0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day1 -0.6 -4.8 +0.1 -0.7 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day3 -0.4 -4.9 +0.1 -0.7 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.3 -4.6 +0.1 -1.1 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day1 -0.5 -4.7 +0.1 -0.7 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.1 -4.3 +0.1 -1.5 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day1 -0.5 -5.0 +0.1 -0.5 -0.2
carbon source D-Galactose (C) -1.9 -3.8 +0.3 -0.0 -0.3
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