Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 297 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1058_RS05660 and HMPREF1058_RS05655 are separated by 89 nucleotidesHMPREF1058_RS05655 and HMPREF1058_RS05650 are separated by 26 nucleotidesHMPREF1058_RS05650 and HMPREF1058_RS05645 are separated by 21 nucleotidesHMPREF1058_RS05645 and HMPREF1058_RS05640 are separated by 4 nucleotides HMPREF1058_RS05660: HMPREF1058_RS05660 - hypothetical protein, at 109,399 to 110,166 _RS05660 HMPREF1058_RS05655: HMPREF1058_RS05655 - DUF4848 domain-containing protein, at 110,256 to 111,099 _RS05655 HMPREF1058_RS05650: HMPREF1058_RS05650 - hypothetical protein, at 111,126 to 111,752 _RS05650 HMPREF1058_RS05645: HMPREF1058_RS05645 - DUF4249 domain-containing protein, at 111,774 to 112,745 _RS05645 HMPREF1058_RS05640: HMPREF1058_RS05640 - TonB-dependent receptor, at 112,750 to 115,314 _RS05640
Group Condition HMPREF1058_RS05660 HMPREF1058_RS05655 HMPREF1058_RS05650 HMPREF1058_RS05645 HMPREF1058_RS05640
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 -0.4 -0.0 -1.4 -0.6 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 +0.4 -0.0 -1.9 -0.7 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.4 -0.3 -2.0 -0.5 +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 +0.2 -0.3 -1.3 -1.1 +0.1
carbon source Dextran 5 mg/ml (C) +0.0 -0.0 -1.9 -0.1 +0.0
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -0.1 -0.0 -1.9 +0.1 -0.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day1 -0.1 +0.0 -1.0 -0.8 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +0.3 -0.3 -1.5 -0.3 +0.2
carbon source NAG (C) +0.9 -0.1 -2.1 -0.2 -0.1
carbon source D-Glucose (C) +0.0 +0.1 -1.5 +0.4 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 +0.6 +0.4 -2.0 -0.1 +0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2 +0.3 +0.1 -1.1 -0.3 +0.2
carbon source Galactose 1-phosphate dipotassium salt (C) +0.7 -0.4 -0.2 -0.8 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 +0.6 -0.2 -1.1 -0.1 +0.1
carbon source D-Galacturonic Acid 20 mM (C) -0.5 -0.3 +0.7 -0.3 +0.1
carbon source NAG (C) +0.9 +0.3 -1.1 -0.4 +0.1
carbon source beta-Cyclodextrin 5 mg/ml (C) +0.2 -0.5 +0.5 -0.6 +0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 +0.6 -0.1 +0.7 -1.2 +0.1
carbon source Sucrose 20 mM (C) -0.1 +0.2 +1.6 -1.5 +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 +0.5 +0.5 -0.5 -0.3 +0.2
carbon source (+)-Arabinogalactan 5 mg/ml (C) -0.8 -0.3 +1.0 -0.1 +0.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 +1.1 -0.4 +0.2 -0.5 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 +0.6 +0.0 -0.6 +0.6 +0.4
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.9 +0.2 +0.8 -0.7 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 +1.2 -0.1 -0.4 -0.0 +0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 +0.8 -0.7 +1.2 +0.3 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 +0.6 -0.0 +1.0 +0.3 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.7 +0.6 +1.0 +0.3 +0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 +1.1 +0.4 +1.3 +0.0 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 +1.4 +0.6 +1.4 -0.0 +0.4
remove
HMPREF1058_RS05660
plot		 remove
HMPREF1058_RS05655
plot		 remove
HMPREF1058_RS05650		 remove
HMPREF1058_RS05645
plot		 remove
HMPREF1058_RS05640
plot