Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS04705	HMPREF1058_RS04700	HMPREF1058_RS04695	HMPREF1058_RS04690	HMPREF1058_RS04685
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6	N.D.	-0.8	-0.5	+0.3	-3.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6	N.D.	-0.7	-0.4	+0.2	-2.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6	N.D.	+0.1	+0.1	+0.0	-3.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	N.D.	-0.4	+0.3	+0.2	-3.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4	N.D.	-0.6	-0.2	+0.2	-2.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5	N.D.	-0.6	-0.4	+0.2	-2.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5	N.D.	-0.5	-0.4	+0.1	-2.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4	N.D.	-0.7	-0.1	+0.2	-2.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3	N.D.	-0.7	-0.7	+0.1	-1.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5	N.D.	-0.0	-0.2	+0.3	-2.8
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8	N.D.	+0.1	-0.1	+0.4	-3.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	N.D.	-0.1	+0.3	+0.2	-3.1
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	N.D.	-0.5	-0.1	-2.1	+0.0
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	N.D.	-0.0	-0.1	-2.4	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4	N.D.	-0.5	+0.0	+0.1	-2.0
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7	N.D.	-0.0	+0.0	+0.3	-2.6
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3	N.D.	-0.8	+0.1	+0.1	-1.8
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4	N.D.	-0.0	-0.3	+0.3	-2.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5	N.D.	+0.2	+0.0	+0.1	-2.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14	N.D.	+0.3	+0.5	+0.8	-3.6
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	N.D.	+0.1	+0.2	+0.4	-2.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9	N.D.	+0.3	-0.8	+0.6	-1.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9	N.D.	+0.5	-0.4	+0.5	-1.6
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	N.D.	+0.3	+0.3	+0.6	-2.1
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	N.D.	+1.2	-0.8	-1.1	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7	N.D.	+0.3	-0.2	+0.6	-1.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9	N.D.	+0.4	+0.3	+0.6	-1.9
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6	N.D.	+0.8	-0.4	+0.5	-1.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7	N.D.	+0.4	+0.2	+0.5	-1.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9	N.D.	+0.8	-0.1	+0.7	-1.7