Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS03260 and HMPREF1058_RS03255 are separated by 112 nucleotidesHMPREF1058_RS03255 and HMPREF1058_RS03250 are separated by 12 nucleotidesHMPREF1058_RS03250 and HMPREF1058_RS03245 are separated by 219 nucleotidesHMPREF1058_RS03245 and HMPREF1058_RS03240 are separated by 164 nucleotides HMPREF1058_RS03260: HMPREF1058_RS03260 - HesA/MoeB/ThiF family protein, at 319,344 to 320,036 _RS03260 HMPREF1058_RS03255: HMPREF1058_RS03255 - glutathionylspermidine synthase family protein, at 320,149 to 321,273 _RS03255 HMPREF1058_RS03250: HMPREF1058_RS03250 - hypothetical protein, at 321,286 to 321,639 _RS03250 HMPREF1058_RS03245: HMPREF1058_RS03245 - thiamine phosphate synthase, at 321,859 to 322,467 _RS03245 HMPREF1058_RS03240: HMPREF1058_RS03240 - ribose-phosphate pyrophosphokinase, at 322,632 to 323,570 _RS03240
Group Condition HMPREF1058_RS03260 HMPREF1058_RS03255 HMPREF1058_RS03250 HMPREF1058_RS03245 HMPREF1058_RS03240
carbon source D-Xylose (C) -3.3 -0.3 -0.3 -4.1 N.D.
carbon source Fructose-6-phosphate (C) -4.0 +0.1 -0.1 -3.9 N.D.
carbon source D-Glucose-6-Phosphate (C) -3.7 -0.0 +0.1 -3.9 N.D.
carbon source D-Glucose-6-Phosphate (C) -3.4 -0.1 -0.1 -3.9 N.D.
carbon source Mannose-6-Phosphate (C) -3.5 -0.1 +0.2 -3.9 N.D.
carbon source a-Cyclodextrin (C) -3.5 +0.1 -0.3 -3.6 N.D.
carbon source D-Xylose (C) -3.1 -0.1 +0.1 -4.0 N.D.
carbon source NAG (C) -3.6 -0.3 +0.1 -3.3 N.D.
carbon source a-Cyclodextrin (C) -3.6 +0.2 +0.0 -3.6 N.D.
carbon source D-Maltose 20 mM (C) -3.0 -0.1 -0.1 -3.7 N.D.
carbon source Fructose-6-phosphate (C) -3.7 -0.1 -0.2 -2.8 N.D.
carbon source D-Mannose (C) -3.7 -0.3 +0.4 -3.2 N.D.
carbon source D-Glucose (C) -3.8 -0.6 +0.1 -2.0 N.D.
carbon source D-Mannose (C) -3.3 +0.1 -1.0 -1.8 N.D.
carbon source D-Maltose 20 mM (C) -3.2 +0.0 -0.0 -2.8 N.D.
carbon source D-Glucose 20 mM (C) -2.4 +0.1 +0.0 -3.8 N.D.
carbon source Sucrose 20 mM (C) -2.9 +0.1 -0.1 -3.1 N.D.
carbon source NAG 20 mM (C) -2.8 +0.4 +0.3 -3.8 N.D.
carbon source D-Galactose (C) -2.6 -0.0 +0.2 -3.2 N.D.
carbon source D-Mannose 20 mM (C) -2.6 +0.1 -0.2 -3.0 N.D.
carbon source Beta-Lactose 20 mM (C) -2.1 +0.2 +0.1 -3.8 N.D.
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -3.5 +0.2 -0.0 -2.2 N.D.
carbon source NAG (C) -3.6 +0.2 -0.1 -2.0 N.D.
carbon source D-Maltose 20 mM (C) -3.2 +0.6 -0.2 -2.6 N.D.
carbon source D-Mannose 20 mM (C) -2.0 +0.1 +0.2 -3.6 N.D.
carbon source beta-Cyclodextrin 5 mg/ml (C) -2.7 +0.4 +0.3 -3.1 N.D.
carbon source NAG 20 mM (C) -1.9 +0.1 +0.4 -3.6 N.D.
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) -1.9 +0.5 -0.1 -3.5 N.D.
carbon source Arabinan from sugar beet 5mg/ml (C) -2.5 +0.3 +0.4 -3.0 N.D.
carbon source Beta-Lactose 20 mM (C) -2.7 +0.3 +0.3 -2.5 N.D.
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