Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS00625 and HMPREF1058_RS00620 are separated by 15 nucleotidesHMPREF1058_RS00620 and HMPREF1058_RS00615 are separated by 148 nucleotidesHMPREF1058_RS00615 and HMPREF1058_RS00610 are separated by 635 nucleotidesHMPREF1058_RS00610 and HMPREF1058_RS00605 are separated by 41 nucleotides HMPREF1058_RS00625: HMPREF1058_RS00625 - MFS transporter, at 30,153 to 31,313 _RS00625 HMPREF1058_RS00620: HMPREF1058_RS00620 - GH32 C-terminal domain-containing protein, at 31,329 to 33,212 _RS00620 HMPREF1058_RS00615: HMPREF1058_RS00615 - TonB-dependent receptor, at 33,361 to 35,679 _RS00615 HMPREF1058_RS00610: HMPREF1058_RS00610 - DsbA family protein, at 36,315 to 36,926 _RS00610 HMPREF1058_RS00605: HMPREF1058_RS00605 - prolipoprotein diacylglyceryl transferase, at 36,968 to 37,774 _RS00605
Group Condition HMPREF1058_RS00625 HMPREF1058_RS00620 HMPREF1058_RS00615 HMPREF1058_RS00610 HMPREF1058_RS00605
carbon source D-Raffinose 20 mM (C) -5.0 -4.6 -4.9 -0.1 +0.1
carbon source D-Raffinose 20 mM (C) -4.8 -4.5 -4.6 +0.1 +0.0
carbon source D-Raffinose 20 mM (C) -4.9 -4.1 -4.1 -0.0 -0.1
carbon source D-Raffinose 20 mM (C) -4.8 -4.2 -4.2 +0.3 +0.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day5 -4.2 -3.2 -4.4 -0.0 -0.9
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day5 -3.9 -3.5 -4.4 -0.0 -0.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 -4.7 -3.7 -2.4 -0.0 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -4.9 -3.2 -1.7 +0.0 -2.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -4.4 -3.4 -2.2 -0.6 -1.8
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day6 -4.2 -3.2 -4.0 +0.1 -1.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -5.8 -1.9 -0.3 +0.2 -4.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day6 -3.4 -3.9 -4.2 +0.1 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -4.9 -3.2 -1.9 -0.2 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -4.3 -3.5 -2.4 -0.1 -1.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -4.8 -3.1 -1.7 -0.0 -2.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -5.0 -3.1 -1.9 +0.1 -1.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -4.5 -3.1 -2.2 -0.1 -1.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5 -4.2 -3.4 -2.3 +0.0 -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day6 -4.1 -3.3 -2.3 +0.1 -1.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -5.5 -1.9 -0.5 -0.2 -3.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day7 -3.9 -2.7 -3.3 -0.1 -1.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day4 -3.9 -2.8 -3.5 +0.0 -0.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day6 -3.3 -2.9 -3.7 -0.1 -0.8
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day4 -3.2 -3.0 -3.6 -0.2 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -4.3 -2.8 -1.6 -0.0 -2.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day5 -2.7 -3.0 -4.4 +0.1 -0.6
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day7 -3.6 -3.1 -2.9 -0.3 -0.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day7 -3.3 -3.1 -3.3 +0.2 -1.1
carbon source Sucrose 20 mM (C) +0.9 +5.6 +3.9 +0.4 +0.2
carbon source Sucrose 20 mM (C) +1.8 +5.9 +3.9 +0.2 +0.4
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HMPREF1058_RS00605
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