Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS00255 and HMPREF1058_RS00250 are separated by 10 nucleotidesHMPREF1058_RS00250 and HMPREF1058_RS00245 are separated by 35 nucleotidesHMPREF1058_RS00245 and HMPREF1058_RS00240 are separated by 100 nucleotidesHMPREF1058_RS00240 and HMPREF1058_RS00235 are separated by 68 nucleotides HMPREF1058_RS00255: HMPREF1058_RS00255 - transposase family protein, at 22,185 to 22,535 _RS00255 HMPREF1058_RS00250: HMPREF1058_RS00250 - transposase, at 22,546 to 23,550 _RS00250 HMPREF1058_RS00245: HMPREF1058_RS00245 - DUF5110 domain-containing protein, at 23,586 to 23,849 _RS00245 HMPREF1058_RS00240: HMPREF1058_RS00240 - tRNA-Leu, at 23,950 to 24,031 _RS00240 HMPREF1058_RS00235: HMPREF1058_RS00235 - S41 family peptidase, at 24,100 to 25,128 _RS00235
Group Condition HMPREF1058_RS00255 HMPREF1058_RS00250 HMPREF1058_RS00245 HMPREF1058_RS00240 HMPREF1058_RS00235
carbon source D-Xylose 2.5 mg/ml (C) N.D. N.D. +0.9 N.D. +0.2
carbon source D-Glucose (C) N.D. N.D. +1.0 N.D. +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 N.D. N.D. +0.6 N.D. +0.6
carbon source Mannose-6-Phosphate (C) N.D. N.D. +1.0 N.D. +0.2
carbon source D-Galactose 20 mM (C) N.D. N.D. +0.9 N.D. +0.3
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. N.D. +1.2 N.D. +0.0
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. N.D. +1.0 N.D. +0.2
carbon source Fructose-6-phosphate (C) N.D. N.D. +1.0 N.D. +0.3
carbon source D-Mannose 20 mM (C) N.D. N.D. +0.8 N.D. +0.5
carbon source Sucrose 20 mM (C) N.D. N.D. +0.9 N.D. +0.4
carbon source D-Fructose 20 mM (C) N.D. N.D. +0.9 N.D. +0.4
carbon source Inulin from chicory; autoclaved 2.5 mg/ml (C) N.D. N.D. +1.0 N.D. +0.2
carbon source Fructose-6-phosphate (C) N.D. N.D. +1.1 N.D. +0.2
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. N.D. +1.1 N.D. +0.2
carbon source D-Glucose 2.5 mg/ml (C) N.D. N.D. +1.0 N.D. +0.3
carbon source NAG 20 mM (C) N.D. N.D. +0.9 N.D. +0.4
carbon source D-Mannose 20 mM (C) N.D. N.D. +1.0 N.D. +0.4
carbon source D-Galactose 2.5 mg/ml (C) N.D. N.D. +1.1 N.D. +0.3
carbon source D-Galactose 2.5 mg/ml (C) N.D. N.D. +0.9 N.D. +0.5
carbon source D-Glucose (C) N.D. N.D. +1.3 N.D. +0.1
carbon source D-Glucose 2.5 mg/ml (C) N.D. N.D. +1.0 N.D. +0.4
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) N.D. N.D. +1.1 N.D. +0.3
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) N.D. N.D. +1.1 N.D. +0.4
carbon source D-Mannose 2.5 mg/ml (C) N.D. N.D. +1.2 N.D. +0.4
carbon source D-Glucose 20 mM (C) N.D. N.D. +1.3 N.D. +0.3
carbon source NAG (C) N.D. N.D. +1.7 N.D. -0.1
carbon source D-Mannose 2.5 mg/ml (C) N.D. N.D. +1.3 N.D. +0.4
carbon source D-Mannose (C) N.D. N.D. +1.4 N.D. +0.4
carbon source D-Mannose (C) N.D. N.D. +1.6 N.D. +0.2
carbon source NAG (C) N.D. N.D. +1.6 N.D. +0.2
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