Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06569 and H281DRAFT_06570 are separated by 739 nucleotidesH281DRAFT_06570 and H281DRAFT_06571 overlap by 4 nucleotidesH281DRAFT_06571 and H281DRAFT_06572 are separated by 278 nucleotidesH281DRAFT_06572 and H281DRAFT_06573 are separated by 787 nucleotides H281DRAFT_06569: H281DRAFT_06569 - hypothetical protein, at 9,942 to 10,133 _06569 H281DRAFT_06570: H281DRAFT_06570 - hypothetical protein, at 10,873 to 11,676 _06570 H281DRAFT_06571: H281DRAFT_06571 - FOG: Ankyrin repeat, at 11,673 to 12,278 _06571 H281DRAFT_06572: H281DRAFT_06572 - Glutathione S-transferase, at 12,557 to 13,270 _06572 H281DRAFT_06573: H281DRAFT_06573 - putative addiction module antidote protein, CC2985 family, at 14,058 to 14,261 _06573
Group Condition H281DRAFT_06569 H281DRAFT_06570 H281DRAFT_06571 H281DRAFT_06572 H281DRAFT_06573
carbon source Sebacic (C) +0.0 +0.3 -0.4 -0.4 -0.9
carbon source Pimelic (C) -0.4 +0.1 -0.2 -0.1 -0.8
carbon source Valeric (C) -0.2 +0.1 -0.3 +0.1 -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.3 -0.1 +0.1 -0.0 -0.7
carbon source D-Glucose (C) -0.1 +0.0 -0.1 -0.0 -0.8
carbon source adipate (C) -0.5 +0.1 -0.1 -0.3 -0.2
carbon source succinate (C) +0.2 -0.1 +0.0 -0.2 -0.7
carbon source Protocatechuic Acid (C) -0.2 +0.2 -0.3 +0.0 -0.5
carbon source Valeric (C) -0.0 +0.2 -0.6 -0.2 -0.1
carbon source acetate (C) +0.1 +0.3 -0.3 -0.1 -0.6
carbon source Malonic (C) -0.2 -0.0 +0.1 +0.2 -0.7
carbon source Malonic (C) -0.7 +0.0 -0.1 +0.2 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 +0.0 -0.3 -0.1 +0.2
carbon source Suberic (C) -0.1 +0.2 -0.1 -0.1 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.3 -0.3 -0.0 +0.4
carbon source Hexanoic (C) -0.2 -0.1 -0.2 +0.4 -0.3
carbon source Hexanoic (C) -0.5 +0.2 +0.0 -0.2 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.1 +0.4 -0.2 +0.2 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.3 -0.1 +0.0 +0.6
carbon source Protocatechuic Acid (C) -0.4 -0.1 +0.0 +0.0 +0.5
carbon source 4-Methyl-2-oxopentanoic (C) -0.3 +0.0 -0.2 +0.2 +0.5
carbon source 3-hydroxybutyric (C) -0.1 -0.1 -0.3 +0.0 +0.7
carbon source L-Glutamic (C) -0.1 +0.2 +0.4 +0.1 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.4 +0.3 -0.1 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.4 -0.2 -0.3 -0.0 +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 -0.1 -0.2 -0.1 +0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.2 +0.6 -0.0 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 +0.2 +0.1 -0.1 +0.4
carbon source Phenylacetic (C) +0.1 +0.1 -0.0 +0.0 +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 +0.2 -0.0 +0.1 +0.5
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