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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_06565 and H281DRAFT_06566 are separated by 259 nucleotides
H281DRAFT_06566 and H281DRAFT_06567 are separated by 515 nucleotides
H281DRAFT_06567 and H281DRAFT_06568 are separated by 177 nucleotides
H281DRAFT_06568 and H281DRAFT_06569 are separated by 961 nucleotides
H281DRAFT_06565: H281DRAFT_06565 - filamentous hemagglutinin family N-terminal domain-containing protein, at 4,808 to 7,060
_06565
H281DRAFT_06566: H281DRAFT_06566 - hypothetical protein, at 7,320 to 7,823
_06566
H281DRAFT_06567: H281DRAFT_06567 - hypothetical protein, at 8,339 to 8,518
_06567
H281DRAFT_06568: H281DRAFT_06568 - DNA-binding protein H-NS, at 8,696 to 8,980
_06568
H281DRAFT_06569: H281DRAFT_06569 - hypothetical protein, at 9,942 to 10,133
_06569
Group
Condition
H281DRAFT
_06565
H281DRAFT
_06566
H281DRAFT
_06567
H281DRAFT
_06568
H281DRAFT
_06569
carbon source
succinate (C)
-0.1
+0.3
-2.9
+0.5
+0.2
carbon source
Valeric (C)
+0.2
+0.0
-1.6
+0.0
-0.2
carbon source
2-Deoxy-D-ribonic lithium salt (C)
+0.1
-0.1
-0.6
-0.7
-0.0
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
+0.0
-0.0
-2.1
+0.7
+0.2
carbon source
Gallic Acid (C)
+0.2
-0.3
-0.3
-0.5
-0.3
carbon source
propionate (C)
+0.0
+0.1
-0.9
+0.2
-0.2
carbon source
Malonic (C)
+0.0
+0.0
+0.4
-0.4
-0.7
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.2
-0.1
+0.5
-0.6
-0.3
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
+0.4
-0.0
-1.4
+0.2
+0.4
carbon source
adipate (C)
+0.0
+0.2
-0.8
-0.2
+0.3
carbon source
2-Deoxy-D-Ribose 20 mM (C)
+0.0
+0.1
+0.5
-0.8
-0.2
carbon source
p-Coumaric (C)
+0.1
+0.1
+0.4
-0.7
-0.2
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.0
+0.1
-0.9
+0.2
+0.3
carbon source
Dodecandioic (C)
+0.3
+0.3
-0.8
+0.2
+0.0
carbon source
D,L-Lactate (C)
+0.0
+0.1
-0.9
+0.8
-0.0
phage
Bu1_10
+0.3
+0.2
+0.5
-0.5
-0.2
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days
-0.1
+0.0
-0.7
+1.1
+0.0
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
-0.0
+0.0
+0.8
-0.6
+0.1
carbon source
2'-Deoxyinosine 10 mM (C)
-0.0
+0.1
+0.9
-0.6
-0.0
carbon source
adipate (C)
+0.2
+0.2
+0.3
+0.2
-0.5
carbon source
D-Glucose 20 mM (C)
+0.0
-0.0
+1.0
-0.5
+0.0
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.2
+0.0
+1.1
+0.1
phage
Bu1_100
-0.2
-0.1
+1.0
+0.0
+0.2
lb
LB
+0.2
+0.0
+0.7
+0.4
-0.2
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
+0.1
+0.2
+1.1
-0.1
+0.0
carbon source
2'-Deoxyinosine 10 mM (C)
+0.2
+0.1
+1.1
-0.1
+0.1
carbon source
Azelaic (C)
+0.0
+0.3
+0.6
+0.8
-0.3
carbon source
Valeric (C)
+0.0
+0.1
+1.1
+0.7
-0.0
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
+0.2
+0.2
+0.9
+0.3
+0.2
carbon source
2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
+0.1
+0.3
+1.6
-0.0
-0.0
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