Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06446 and H281DRAFT_06447 are separated by 742 nucleotidesH281DRAFT_06447 and H281DRAFT_06448 are separated by 94 nucleotidesH281DRAFT_06448 and H281DRAFT_06449 are separated by 1208 nucleotidesH281DRAFT_06449 and H281DRAFT_06450 are separated by 39 nucleotides H281DRAFT_06446: H281DRAFT_06446 - molybdopterin synthase subunit MoaD (EC 2.8.1.12), at 51,737 to 51,994 _06446 H281DRAFT_06447: H281DRAFT_06447 - protein PsiE, at 52,737 to 53,195 _06447 H281DRAFT_06448: H281DRAFT_06448 - transcriptional regulator, LysR family, at 53,290 to 54,207 _06448 H281DRAFT_06449: H281DRAFT_06449 - hypothetical protein, at 55,416 to 55,631 _06449 H281DRAFT_06450: H281DRAFT_06450 - ATP-dependent Clp protease ATP-binding subunit ClpC, at 55,671 to 58,448 _06450
Group Condition H281DRAFT_06446 H281DRAFT_06447 H281DRAFT_06448 H281DRAFT_06449 H281DRAFT_06450
carbon source D-Galactose (C) N.D. -0.1 -0.3 -0.3 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 -0.3 -0.5 +0.1
carbon source butyrate (C) N.D. -0.2 -0.0 +0.0 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.0 -0.4 -0.2 -0.1
carbon source Azelaic (C) N.D. -0.1 +0.1 -0.3 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 +0.1 -0.4 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 -0.2 -0.3 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 -0.1 -0.3 -0.1
carbon source adipate (C) N.D. +0.2 -0.0 -0.4 -0.1
carbon source p-Coumaric (C) N.D. +0.0 -0.1 -0.3 +0.2
carbon source 2-furoic (C) N.D. -0.1 -0.3 +0.2 +0.1
carbon source D-Glucose (C) N.D. -0.1 -0.2 +0.4 -0.1
carbon source 3-Hydroxypropionate (C) N.D. -0.1 +0.2 -0.3 +0.2
carbon source Sebacic (C) N.D. +0.3 +0.2 -0.3 -0.0
carbon source 3-Hydroxypropionate (C) N.D. -0.1 +0.3 +0.2 -0.0
phage Bu1_100 N.D. +0.1 -0.2 +0.4 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.1 -0.0 +0.3 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. +0.2 -0.1 +0.1 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.1 -0.1 +0.4 +0.2
control NoPhageControl N.D. -0.0 +0.4 +0.3 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.0 +0.1 +0.3 +0.2
carbon source D-Glucose 20 mM (C) N.D. +0.1 +0.2 +0.1 +0.2
phage Bu1_100 N.D. +0.3 +0.2 -0.0 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.4 +0.2 -0.2 +0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. +0.1 +0.1 +0.2 +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.1 +0.2 +0.1 +0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.2 +0.3 +0.2 -0.1
ecofab LB in EcoFAB_3.5mL N.D. +0.1 +0.3 -0.0 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. +0.2 +0.3 +0.2 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. +0.3 +0.4 +0.5 +0.3
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