Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

Group	Condition	H281DRAFT_06425	H281DRAFT_06426	H281DRAFT_06427	H281DRAFT_06428	H281DRAFT_06429
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	-0.0	-1.4	N.D.	-0.2
carbon source	D-Glucose (C)	N.D.	-0.3	-0.8	N.D.	-0.4
carbon source	Dodecandioic (C)	N.D.	-0.1	-0.8	N.D.	-0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	-0.2	-0.5	N.D.	-0.5
carbon source	3-Hydroxypropionate (C)	N.D.	-0.1	-0.6	N.D.	-0.2
carbon source	2-Deoxy-D-Ribose 20 mM (C)	N.D.	+0.2	-1.0	N.D.	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.1	+0.2	N.D.	-0.9
lb	LB	N.D.	+0.1	-0.6	N.D.	-0.2
carbon source	butyrate (C)	N.D.	-0.2	-0.7	N.D.	+0.2
carbon source	Phenylacetic (C)	N.D.	-0.1	+0.2	N.D.	-0.6
carbon source	Hexanoic (C)	N.D.	+0.0	-0.7	N.D.	+0.2
phage	Bu1_10	N.D.	+0.4	-0.9	N.D.	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	+0.5	N.D.	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	-0.0	+0.8	N.D.	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.2	+0.6	N.D.	-0.2
carbon source	Glycerol (C)	N.D.	-0.1	+0.7	N.D.	-0.2
carbon source	Malonic (C)	N.D.	+0.1	+0.5	N.D.	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	N.D.	+0.0	+0.7	N.D.	-0.3
carbon source	Gallic Acid (C)	N.D.	+0.2	+0.7	N.D.	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	+0.2	+0.9	N.D.	-0.5
carbon source	4-Methyl-2-oxopentanoic (C)	N.D.	+0.3	+0.6	N.D.	-0.2
carbon source	D-Glucose (C)	N.D.	-0.1	+0.4	N.D.	+0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	N.D.	+0.0	+1.0	N.D.	-0.2
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	+0.0	+0.9	N.D.	-0.0
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	N.D.	-0.0	+1.0	N.D.	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	-0.0	+1.1	N.D.	-0.1
control	NoPhageControl	N.D.	+0.1	+0.6	N.D.	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	N.D.	+0.2	+1.2	N.D.	-0.4
carbon source	L-Glutamic (C)	N.D.	+0.2	+0.5	N.D.	+0.3
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-0.0	+1.7	N.D.	-0.6