Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_06414	H281DRAFT_06415	H281DRAFT_06416	H281DRAFT_06417	H281DRAFT_06418
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.7	+0.1	+0.1	+0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2	-0.1	-0.1	+0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1	-0.0	-0.0	-0.0	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8	-0.1	-0.5	+0.0	-0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-1.5	+0.0	+0.2	-0.1	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1	-0.0	-0.1	+0.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.3	+0.1	-0.1	+0.1	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-1.1	+0.1	+0.2	+0.1	+0.0
carbon source	succinate (C)	-0.1	+0.2	-0.2	-0.1	-0.5
	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0	+0.0	+0.1	+0.2	+0.2
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.2	+0.1	+0.2	-0.2	-0.3
carbon source	Protocatechuic Acid (C)	+0.1	-0.4	-0.2	+0.1	-0.0
carbon source	3-Hydroxypropionate (C)	+0.2	-0.4	+0.0	+0.1	-0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.8	+0.2	-0.1	+0.2	+0.1
carbon source	Malonic (C)	-0.2	-0.4	-0.1	+0.0	+0.3
carbon source	Protocatechuic Acid (C)	-0.0	+0.3	-0.1	-0.2	-0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.6	+0.3	+0.2	+0.2	-0.4
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	-0.0	+0.0	+0.0	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	+0.3	-0.1	+0.2	-0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.4	-0.2	-0.2	+0.2	-0.2
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.1	+0.3	-0.2	+0.2	-0.2
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.5	-0.1	+0.0	+0.0	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	+0.6	-0.2	+0.0	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0	+0.5	+0.0	+0.1	+0.8
carbon source	Hexanoic (C)	+0.0	+0.2	+0.5	+0.0	-0.2
carbon source	butyrate (C)	-0.0	+0.8	+0.0	-0.0	-0.2
carbon source	Hexanoic (C)	-0.1	+0.3	+0.2	-0.1	+0.2
carbon source	Valeric (C)	+0.1	+0.7	+0.3	-0.1	-0.3
carbon source	Malonic (C)	-0.2	+0.4	+0.3	-0.1	+0.4
carbon source	Azelaic (C)	+0.2	+0.2	-0.0	-0.0	+0.6