Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06349 and H281DRAFT_06350 are separated by 89 nucleotidesH281DRAFT_06350 and H281DRAFT_06351 are separated by 285 nucleotidesH281DRAFT_06351 and H281DRAFT_06352 are separated by 14 nucleotidesH281DRAFT_06352 and H281DRAFT_06353 are separated by 79 nucleotides H281DRAFT_06349: H281DRAFT_06349 - hypothetical protein, at 23,750 to 23,968 _06349 H281DRAFT_06350: H281DRAFT_06350 - hypothetical protein, at 24,058 to 24,387 _06350 H281DRAFT_06351: H281DRAFT_06351 - succinate semialdehyde dehydrogenase (EC 1.2.1.16), at 24,673 to 26,148 _06351 H281DRAFT_06352: H281DRAFT_06352 - 2-haloacid dehalogenase, at 26,163 to 26,882 _06352 H281DRAFT_06353: H281DRAFT_06353 - transcriptional regulator, LysR family, at 26,962 to 27,861 _06353
Group Condition H281DRAFT_06349 H281DRAFT_06350 H281DRAFT_06351 H281DRAFT_06352 H281DRAFT_06353
carbon source Gallic Acid (C) N.D. -0.9 -0.2 +0.2 -0.3
carbon source Protocatechuic Acid (C) N.D. -0.7 -0.1 -0.1 -0.1
carbon source Azelaic (C) N.D. -1.0 +0.1 +0.2 -0.1
carbon source D-Glucose (C) N.D. -0.7 +0.2 -0.0 -0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.6 +0.1 -0.2 -0.1
carbon source Protocatechuic Acid (C) N.D. -0.6 -0.1 -0.1 +0.1
carbon source D-Glucose (C) N.D. -0.9 -0.1 +0.1 +0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.6 -0.2 +0.1 +0.1
carbon source adipate (C) N.D. -0.2 +0.2 -0.5 -0.0
carbon source Phenylacetic (C) N.D. -0.2 +0.2 +0.0 -0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.6 -0.3 +0.4 +0.1
phage Bu1_10 N.D. +0.3 -0.3 -0.1 -0.4
carbon source D-Galactose (C) N.D. -0.2 +0.1 +0.2 -0.5
carbon source succinate (C) N.D. -0.7 +0.3 +0.2 +0.0
carbon source D-Glucose (C) N.D. -0.5 -0.1 +0.2 +0.1
phage Bu1_100 N.D. +0.8 -0.1 -0.3 -0.6
carbon source Malonic (C) N.D. -0.5 -0.0 +0.2 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.2 +0.1 -0.3 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.6 +0.2 +0.2 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.5 +0.0 -0.4 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 -0.2 -0.1 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.6 +0.2 -0.2 -0.2
carbon source Valeric (C) N.D. -0.2 +0.6 +0.1 +0.0
carbon source Sebacic (C) N.D. +0.8 -0.2 +0.0 +0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. +0.5 -0.2 +0.2 +0.2
carbon source adipate (C) N.D. +0.4 +0.5 -0.1 +0.0
carbon source Hexanoic (C) N.D. -0.1 +0.2 +0.2 +0.5
carbon source butyrate (C) N.D. +0.2 +0.4 +0.2 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.8 +0.0 -0.0 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.5 +0.0 +0.3 +0.4
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