Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06347 and H281DRAFT_06348 are separated by 349 nucleotidesH281DRAFT_06348 and H281DRAFT_06349 are separated by 136 nucleotidesH281DRAFT_06349 and H281DRAFT_06350 are separated by 89 nucleotidesH281DRAFT_06350 and H281DRAFT_06351 are separated by 285 nucleotides H281DRAFT_06347: H281DRAFT_06347 - hypothetical protein, at 21,561 to 21,905 _06347 H281DRAFT_06348: H281DRAFT_06348 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 22,255 to 23,613 _06348 H281DRAFT_06349: H281DRAFT_06349 - hypothetical protein, at 23,750 to 23,968 _06349 H281DRAFT_06350: H281DRAFT_06350 - hypothetical protein, at 24,058 to 24,387 _06350 H281DRAFT_06351: H281DRAFT_06351 - succinate semialdehyde dehydrogenase (EC 1.2.1.16), at 24,673 to 26,148 _06351
Group Condition H281DRAFT_06347 H281DRAFT_06348 H281DRAFT_06349 H281DRAFT_06350 H281DRAFT_06351
carbon source Protocatechuic Acid (C) +0.1 -2.8 N.D. -0.7 +0.2
carbon source Protocatechuic Acid (C) -0.0 -3.3 N.D. -0.0 +0.5
carbon source acetate (C) -1.5 -0.4 N.D. -0.4 +0.2
carbon source Protocatechuic Acid (C) -0.6 -0.6 N.D. -0.6 -0.1
carbon source Gallic Acid (C) -0.6 -0.2 N.D. -0.9 -0.2
carbon source 3-Hydroxypropionate (C) -1.1 -0.1 N.D. -0.4 -0.0
carbon source Protocatechuic Acid (C) -1.4 -0.1 N.D. -0.1 -0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.3 -0.4 N.D. -0.6 -0.2
carbon source propionate (C) -0.7 -0.4 N.D. -0.4 +0.1
carbon source Protocatechuic Acid (C) +0.0 -0.5 N.D. -0.7 -0.1
carbon source D-Glucose (C) -0.3 +0.1 N.D. -0.9 -0.1
carbon source Azelaic (C) -0.2 +0.0 N.D. -1.0 +0.1
carbon source D-Glucose (C) -0.6 +0.3 N.D. -0.7 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 -0.2 N.D. -0.6 -0.3
carbon source Malonic (C) -0.5 +0.3 N.D. -0.5 -0.0
carbon source Malonic (C) -0.9 -0.1 N.D. +0.3 -0.0
carbon source succinate (C) +0.1 -0.3 N.D. -0.7 +0.3
carbon source adipate (C) -1.4 +0.0 N.D. +0.4 +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -0.6 +0.2 N.D. +0.2 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.3 -0.4 N.D. +0.5 -0.1
carbon source Valeric (C) -0.3 -0.2 N.D. -0.2 +0.6
carbon source Sebacic (C) -0.3 +0.0 N.D. +0.8 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.6 +0.4 N.D. -0.5 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.8 -0.2 N.D. -0.3 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 -0.4 N.D. +0.6 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 -0.1 N.D. +0.6 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.2 N.D. +0.6 -0.2
phage Bu1_100 +0.7 -0.3 N.D. +0.5 +0.2
phage Bu1_100 +0.3 +0.2 N.D. +0.8 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.2 +0.2 N.D. -0.2 +0.3
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