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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_06309 and H281DRAFT_06310 are separated by 16 nucleotides
H281DRAFT_06310 and H281DRAFT_06311 are separated by 207 nucleotides
H281DRAFT_06311 and H281DRAFT_06312 are separated by 19 nucleotides
H281DRAFT_06312 and H281DRAFT_06313 are separated by 77 nucleotides
H281DRAFT_06309: H281DRAFT_06309 - ribonuclease T1, at 93,580 to 93,996
_06309
H281DRAFT_06310: H281DRAFT_06310 - Barstar (barnase inhibitor), at 94,013 to 94,573
_06310
H281DRAFT_06311: H281DRAFT_06311 - 16S rRNA (uracil1498-N3)-methyltransferase, at 94,781 to 95,521
_06311
H281DRAFT_06312: H281DRAFT_06312 - Uncharacterized conserved protein PhnB, glyoxalase superfamily, at 95,541 to 95,987
_06312
H281DRAFT_06313: H281DRAFT_06313 - spermidine synthase (EC 2.5.1.16), at 96,065 to 96,934
_06313
Group
Condition
H281DRAFT
_06309
H281DRAFT
_06310
H281DRAFT
_06311
H281DRAFT
_06312
H281DRAFT
_06313
phage
Bu1_100
-0.5
-4.3
-0.8
-0.6
-0.3
phage
Bu1_100
-0.1
-3.9
-0.4
-0.5
-0.1
phage
Bu1_10
+0.1
-3.6
-0.2
-0.5
-0.3
carbon source
Malonic (C)
-0.4
-1.7
-0.3
-0.2
+0.0
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.8
-1.9
+0.0
+0.0
+0.1
carbon source
Protocatechuic Acid (C)
-0.3
-2.2
-0.1
+0.1
-0.0
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.4
-2.6
+0.3
+0.1
+0.1
carbon source
D-Glucose (C)
-0.3
-2.2
+0.2
+0.1
-0.1
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.6
-2.2
+0.5
+0.1
-0.0
in planta
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.4
-2.3
+0.3
+0.0
+0.1
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.4
-2.4
+0.3
+0.0
+0.2
carbon source
D-Glucose (C)
-0.1
-2.1
-0.1
+0.0
+0.0
carbon source
Glycerol (C)
-0.4
-1.5
-0.1
+0.1
-0.2
carbon source
D,L-Lactate (C)
-0.2
-1.6
+0.0
-0.1
-0.2
carbon source
Protocatechuic Acid (C)
-0.4
-1.5
-0.3
+0.2
-0.0
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.5
-1.8
+0.2
-0.0
+0.0
carbon source
D-Glucose (C)
-0.4
-1.7
+0.1
-0.1
+0.1
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.5
-1.9
+0.2
+0.3
+0.2
carbon source
D-Galactose (C)
-0.3
-2.0
+0.2
+0.2
+0.2
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.4
-2.2
+0.6
+0.3
+0.2
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.6
-1.5
+0.5
+0.2
+0.0
carbon source
D-Glucose 20 mM (C)
-0.6
-1.1
+0.0
+0.3
+0.1
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.4
-1.5
+0.3
+0.1
+0.1
carbon source
Sebacic (C)
-0.1
-1.7
+0.3
-0.0
+0.4
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.4
-1.3
+0.5
+0.0
+0.1
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.5
-1.7
+0.6
+0.4
+0.1
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days
-0.5
-1.2
+0.6
-0.0
+0.1
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.4
-1.0
+0.6
+0.2
-0.0
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.5
+1.1
+0.3
+0.1
+0.0
carbon source
4-Hydroxybenzoic Acid (C)
+0.6
+0.1
+0.3
+1.0
+0.5
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