Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06309 and H281DRAFT_06310 are separated by 16 nucleotidesH281DRAFT_06310 and H281DRAFT_06311 are separated by 207 nucleotidesH281DRAFT_06311 and H281DRAFT_06312 are separated by 19 nucleotidesH281DRAFT_06312 and H281DRAFT_06313 are separated by 77 nucleotides H281DRAFT_06309: H281DRAFT_06309 - ribonuclease T1, at 93,580 to 93,996 _06309 H281DRAFT_06310: H281DRAFT_06310 - Barstar (barnase inhibitor), at 94,013 to 94,573 _06310 H281DRAFT_06311: H281DRAFT_06311 - 16S rRNA (uracil1498-N3)-methyltransferase, at 94,781 to 95,521 _06311 H281DRAFT_06312: H281DRAFT_06312 - Uncharacterized conserved protein PhnB, glyoxalase superfamily, at 95,541 to 95,987 _06312 H281DRAFT_06313: H281DRAFT_06313 - spermidine synthase (EC 2.5.1.16), at 96,065 to 96,934 _06313
Group Condition H281DRAFT_06309 H281DRAFT_06310 H281DRAFT_06311 H281DRAFT_06312 H281DRAFT_06313
phage Bu1_100 -0.5 -4.3 -0.8 -0.6 -0.3
phage Bu1_100 -0.1 -3.9 -0.4 -0.5 -0.1
phage Bu1_10 +0.1 -3.6 -0.2 -0.5 -0.3
carbon source Malonic (C) -0.4 -1.7 -0.3 -0.2 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.9 +0.0 +0.0 +0.1
carbon source Protocatechuic Acid (C) -0.3 -2.2 -0.1 +0.1 -0.0
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.6 +0.3 +0.1 +0.1
carbon source D-Glucose (C) -0.3 -2.2 +0.2 +0.1 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -2.2 +0.5 +0.1 -0.0
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.3 +0.3 +0.0 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -2.4 +0.3 +0.0 +0.2
carbon source D-Glucose (C) -0.1 -2.1 -0.1 +0.0 +0.0
carbon source Glycerol (C) -0.4 -1.5 -0.1 +0.1 -0.2
carbon source D,L-Lactate (C) -0.2 -1.6 +0.0 -0.1 -0.2
carbon source Protocatechuic Acid (C) -0.4 -1.5 -0.3 +0.2 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -1.8 +0.2 -0.0 +0.0
carbon source D-Glucose (C) -0.4 -1.7 +0.1 -0.1 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.9 +0.2 +0.3 +0.2
carbon source D-Galactose (C) -0.3 -2.0 +0.2 +0.2 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.2 +0.6 +0.3 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.5 +0.5 +0.2 +0.0
carbon source D-Glucose 20 mM (C) -0.6 -1.1 +0.0 +0.3 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.5 +0.3 +0.1 +0.1
carbon source Sebacic (C) -0.1 -1.7 +0.3 -0.0 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.3 +0.5 +0.0 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.7 +0.6 +0.4 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -1.2 +0.6 -0.0 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.0 +0.6 +0.2 -0.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +1.1 +0.3 +0.1 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.6 +0.1 +0.3 +1.0 +0.5
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