Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06287 and H281DRAFT_06288 are separated by 275 nucleotidesH281DRAFT_06288 and H281DRAFT_06289 overlap by 4 nucleotidesH281DRAFT_06289 and H281DRAFT_06290 are separated by 247 nucleotidesH281DRAFT_06290 and H281DRAFT_06291 overlap by 4 nucleotides H281DRAFT_06287: H281DRAFT_06287 - hypothetical protein, at 68,652 to 69,305 _06287 H281DRAFT_06288: H281DRAFT_06288 - UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 69,581 to 70,975 _06288 H281DRAFT_06289: H281DRAFT_06289 - hypothetical protein, at 70,972 to 71,574 _06289 H281DRAFT_06290: H281DRAFT_06290 - exoribonuclease-2, at 71,822 to 73,960 _06290 H281DRAFT_06291: H281DRAFT_06291 - shikimate dehydrogenase (EC 1.1.1.25), at 73,957 to 74,820 _06291
Group Condition H281DRAFT_06287 H281DRAFT_06288 H281DRAFT_06289 H281DRAFT_06290 H281DRAFT_06291
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 -3.0 -1.2 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 -2.6 -1.0 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.6 -2.4 -0.9 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 -2.1 -0.7 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.3 -1.1 -0.0 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 -1.1 -0.1 N.D. N.D.
carbon source propionate (C) -0.3 -1.8 -0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.3 -0.1 N.D. N.D.
carbon source propionate (C) -0.7 -1.5 +0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.1 -0.2 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -0.7 -0.3 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.1 -0.2 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.9 -0.2 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -0.7 -0.1 N.D. N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.9 -0.2 N.D. N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.1 -0.0 N.D. N.D.
carbon source Malonic (C) -0.2 -1.6 +0.3 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.2 +0.2 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 -1.3 -0.6 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.8 -1.8 -0.3 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 -0.7 +0.3 N.D. N.D.
carbon source Pimelic (C) -0.0 -1.6 +0.5 N.D. N.D.
carbon source Dodecandioic (C) +0.0 -1.3 +0.3 N.D. N.D.
carbon source Suberic (C) +0.2 -1.4 +0.3 N.D. N.D.
carbon source acetate (C) -0.6 -0.7 +0.4 N.D. N.D.
phage Bu1_100 +0.6 -1.8 +0.6 N.D. N.D.
carbon source Hexanoic (C) +0.1 -1.1 +0.6 N.D. N.D.
carbon source adipate (C) -0.1 -0.7 +0.8 N.D. N.D.
phage Bu1_10 +0.8 -1.4 +0.7 N.D. N.D.
phage Bu1_100 +0.6 -0.6 +0.6 N.D. N.D.
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