Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06281 and H281DRAFT_06282 are separated by 48 nucleotidesH281DRAFT_06282 and H281DRAFT_06283 are separated by 3 nucleotidesH281DRAFT_06283 and H281DRAFT_06284 are separated by 131 nucleotidesH281DRAFT_06284 and H281DRAFT_06285 are separated by 73 nucleotides H281DRAFT_06281: H281DRAFT_06281 - MJ0042 family finger-like domain-containing protein, at 63,156 to 64,436 _06281 H281DRAFT_06282: H281DRAFT_06282 - [LSU ribosomal protein L11P]-lysine N-methyltransferase, at 64,485 to 65,387 _06282 H281DRAFT_06283: H281DRAFT_06283 - biotin carboxylase, at 65,391 to 66,758 _06283 H281DRAFT_06284: H281DRAFT_06284 - biotin carboxyl carrier protein, at 66,890 to 67,363 _06284 H281DRAFT_06285: H281DRAFT_06285 - 3-dehydroquinate dehydratase, at 67,437 to 67,892 _06285
Group Condition H281DRAFT_06281 H281DRAFT_06282 H281DRAFT_06283 H281DRAFT_06284 H281DRAFT_06285
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 -0.2 N.D. N.D. -1.1
carbon source D,L-Lactate (C) +0.1 -0.1 N.D. N.D. -0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 +0.1 N.D. N.D. -0.8
carbon source D-Glucose (C) -0.1 -0.5 N.D. N.D. +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.5 N.D. N.D. +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.8 +0.4 N.D. N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.4 N.D. N.D. +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 -0.5 N.D. N.D. +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.4 N.D. N.D. +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.4 N.D. N.D. +0.6
ecofab LB in EcoFAB_3.5mL -0.3 +0.4 N.D. N.D. +0.9
carbon source 2-Deoxy-D-Ribose (C) +0.3 +0.2 N.D. N.D. +0.7
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.4 +0.1 N.D. N.D. +0.7
carbon source 2-Deoxy-D-Ribose (C) +0.4 +0.0 N.D. N.D. +0.8
carbon source Malonic (C) +0.3 +0.3 N.D. N.D. +0.7
carbon source Phenylacetic (C) +0.6 +0.0 N.D. N.D. +0.6
carbon source D-Glucose 20 mM (C) +0.4 +0.4 N.D. N.D. +0.6
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.3 +0.2 N.D. N.D. +1.0
carbon source Malonic (C) +0.3 +0.3 N.D. N.D. +1.0
carbon source 2'-Deoxyinosine 10 mM (C) +0.5 +0.3 N.D. N.D. +0.8
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.6 +0.2 N.D. N.D. +0.8
phage Bu1_10 +0.6 -0.4 N.D. N.D. +1.4
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 +0.2 N.D. N.D. +1.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 +0.3 N.D. N.D. +1.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.3 +0.2 N.D. N.D. +0.3
phage Bu1_100 +0.1 +0.2 N.D. N.D. +1.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.1 N.D. N.D. +2.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.4 N.D. N.D. +1.8
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.9 +0.7 N.D. N.D. +0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.2 +0.6 N.D. N.D. +0.7
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