Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_06267	H281DRAFT_06268	H281DRAFT_06269	H281DRAFT_06270	H281DRAFT_06271
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.0	-0.2	N.D.	-2.8
	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.0	-0.1	N.D.	-2.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	-0.3	-0.3	N.D.	-1.1
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	-0.1	-1.3	N.D.	-0.1
carbon source	Hydroxy-L-Proline (C)	N.D.	+0.0	-1.2	N.D.	-0.1
carbon source	2-Deoxy-D-ribonic lithium salt (C)	N.D.	+0.2	-1.1	N.D.	-0.2
carbon source	Protocatechuic Acid (C)	N.D.	-0.1	-1.3	N.D.	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	+0.2	N.D.	-1.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.6	-0.6	N.D.	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.2	-0.4	N.D.	-0.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+0.1	+0.4	N.D.	-1.2
carbon source	D,L-Lactate (C)	N.D.	-0.3	+0.6	N.D.	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	+0.5	N.D.	-1.0
carbon source	succinate (C)	N.D.	-0.2	+0.7	N.D.	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	+0.7	N.D.	-0.8
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	-0.4	+1.0	N.D.	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.5	+0.4	N.D.	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.4	+0.7	N.D.	-0.8
carbon source	4-Methyl-2-oxopentanoic (C)	N.D.	+0.4	+0.7	N.D.	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	N.D.	+0.3	+0.7	N.D.	-0.2
carbon source	Malonic (C)	N.D.	+0.2	+0.9	N.D.	-0.2
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	N.D.	+0.6	+0.7	N.D.	-0.1
phage	Bu1_100	N.D.	+0.1	+0.6	N.D.	+0.6
carbon source	Phenylacetic (C)	N.D.	+0.4	+0.4	N.D.	+0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	N.D.	+0.2	+0.6	N.D.	+0.6
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	+0.6	+0.7	N.D.	+0.5
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	N.D.	+0.1	+3.1	N.D.	-0.0
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	N.D.	+0.3	+2.9	N.D.	+0.3
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	+0.6	+4.4	N.D.	+0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	+0.4	+5.8	N.D.	+0.4