Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06263 and H281DRAFT_06264 are separated by 68 nucleotidesH281DRAFT_06264 and H281DRAFT_06265 are separated by 87 nucleotidesH281DRAFT_06265 and H281DRAFT_06266 are separated by 85 nucleotidesH281DRAFT_06266 and H281DRAFT_06267 are separated by 298 nucleotides H281DRAFT_06263: H281DRAFT_06263 - GTP-binding protein, at 43,648 to 44,769 _06263 H281DRAFT_06264: H281DRAFT_06264 - glutamate 5-kinase, at 44,838 to 45,956 _06264 H281DRAFT_06265: H281DRAFT_06265 - CNP1-like family protein, at 46,044 to 46,601 _06265 H281DRAFT_06266: H281DRAFT_06266 - putative (di)nucleoside polyphosphate hydrolase, at 46,687 to 47,430 _06266 H281DRAFT_06267: H281DRAFT_06267 - prolyl-tRNA synthetase, at 47,729 to 49,465 _06267
Group Condition H281DRAFT_06263 H281DRAFT_06264 H281DRAFT_06265 H281DRAFT_06266 H281DRAFT_06267
carbon source Gallic Acid (C) N.D. -6.6 -0.3 -0.9 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -5.5 +0.0 -1.2 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -5.4 +0.0 -0.9 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -3.8 +0.2 -2.5 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -4.2 +0.2 -1.7 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -5.3 -0.1 -0.2 N.D.
carbon source 2-furoic (C) N.D. -4.9 -0.0 -0.6 N.D.
carbon source D-Galactose (C) N.D. -5.0 +0.2 -0.7 N.D.
carbon source succinate (C) N.D. -5.0 +0.0 -0.5 N.D.
carbon source D-Glucose (C) N.D. -4.9 +0.1 -0.6 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -4.8 +0.2 -0.8 N.D.
carbon source L-Glutamic (C) N.D. -3.2 -0.2 -2.0 N.D.
carbon source Glycerol (C) N.D. -4.5 +0.0 -0.8 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -4.6 -0.1 -0.5 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -2.7 +0.1 -2.5 N.D.
carbon source 3-Hydroxypropionate (C) N.D. -4.8 +0.0 -0.2 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -3.4 +0.1 -1.7 N.D.
carbon source D-Glucose (C) N.D. -4.2 -0.0 -0.8 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -5.1 +0.1 +0.1 N.D.
carbon source D-Glucose (C) N.D. -4.0 +0.0 -1.0 N.D.
carbon source p-Coumaric (C) N.D. -4.7 +0.2 -0.5 N.D.
carbon source Gallic Acid (C) N.D. -4.7 +0.1 -0.3 N.D.
carbon source Malonic (C) N.D. -4.7 +0.0 +0.3 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -4.6 -0.2 +0.6 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -4.6 -0.1 +0.5 N.D.
carbon source adipate (C) N.D. -5.5 +0.2 +1.3 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -4.3 -0.1 +0.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. -7.1 +0.4 +3.2 N.D.
carbon source Phenylacetic (C) N.D. -4.2 +0.0 +1.1 N.D.
carbon source Phenylacetic (C) N.D. -4.0 +0.1 +1.3 N.D.
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