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Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_06261 and H281DRAFT_06262 are separated by 25 nucleotides
H281DRAFT_06262 and H281DRAFT_06263 are separated by 213 nucleotides
H281DRAFT_06263 and H281DRAFT_06264 are separated by 68 nucleotides
H281DRAFT_06264 and H281DRAFT_06265 are separated by 87 nucleotides
H281DRAFT_06261: H281DRAFT_06261 - LSU ribosomal protein L21P, at 42,834 to 43,145
_06261
H281DRAFT_06262: H281DRAFT_06262 - LSU ribosomal protein L27P, at 43,171 to 43,434
_06262
H281DRAFT_06263: H281DRAFT_06263 - GTP-binding protein, at 43,648 to 44,769
_06263
H281DRAFT_06264: H281DRAFT_06264 - glutamate 5-kinase, at 44,838 to 45,956
_06264
H281DRAFT_06265: H281DRAFT_06265 - CNP1-like family protein, at 46,044 to 46,601
_06265
Group
Condition
H281DRAFT
_06261
H281DRAFT
_06262
H281DRAFT
_06263
H281DRAFT
_06264
H281DRAFT
_06265
carbon source
Gallic Acid (C)
N.D.
N.D.
N.D.
-6.6
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
N.D.
N.D.
-7.1
+0.4
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
N.D.
N.D.
N.D.
-5.5
+0.0
carbon source
2-Deoxy-D-Ribose 10 mM (C)
N.D.
N.D.
N.D.
-5.4
+0.0
carbon source
4-Methyl-2-oxopentanoic (C)
N.D.
N.D.
N.D.
-5.3
-0.1
carbon source
adipate (C)
N.D.
N.D.
N.D.
-5.5
+0.2
carbon source
2'-Deoxyinosine 5 mM (C)
N.D.
N.D.
N.D.
-5.1
+0.1
carbon source
2-furoic (C)
N.D.
N.D.
N.D.
-4.9
-0.0
carbon source
succinate (C)
N.D.
N.D.
N.D.
-5.0
+0.0
carbon source
3-Hydroxypropionate (C)
N.D.
N.D.
N.D.
-4.8
+0.0
carbon source
2'-Deoxyinosine 5 mM (C)
N.D.
N.D.
N.D.
-4.6
-0.2
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-4.9
+0.1
carbon source
D-Galactose (C)
N.D.
N.D.
N.D.
-5.0
+0.2
carbon source
Malonic (C)
N.D.
N.D.
N.D.
-4.7
+0.0
carbon source
4-Methyl-2-oxopentanoic (C)
N.D.
N.D.
N.D.
-4.6
-0.1
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
N.D.
N.D.
N.D.
-4.6
-0.1
carbon source
Gallic Acid (C)
N.D.
N.D.
N.D.
-4.7
+0.1
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
N.D.
-4.8
+0.2
carbon source
Glycerol (C)
N.D.
N.D.
N.D.
-4.5
+0.0
carbon source
p-Coumaric (C)
N.D.
N.D.
N.D.
-4.7
+0.2
carbon source
2'-Deoxyinosine 10 mM (C)
N.D.
N.D.
N.D.
-4.3
-0.1
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-4.2
-0.0
carbon source
Hydroxy-L-Proline (C)
N.D.
N.D.
N.D.
-4.4
+0.2
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
-4.3
+0.1
carbon source
Phenylacetic (C)
N.D.
N.D.
N.D.
-4.2
+0.0
carbon source
butyrate (C)
N.D.
N.D.
N.D.
-4.1
-0.0
carbon source
D-Glucose 20 mM (C)
N.D.
N.D.
N.D.
-4.0
-0.1
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
N.D.
-4.0
+0.0
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
N.D.
N.D.
N.D.
-4.2
+0.2
carbon source
Phenylacetic (C)
N.D.
N.D.
N.D.
-4.0
+0.1
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