Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06224 and H281DRAFT_06225 are separated by 614 nucleotidesH281DRAFT_06225 and H281DRAFT_06226 are separated by 154 nucleotidesH281DRAFT_06226 and H281DRAFT_06227 are separated by 197 nucleotidesH281DRAFT_06227 and H281DRAFT_06228 are separated by 302 nucleotides H281DRAFT_06224: H281DRAFT_06224 - hippurate hydrolase, at 433 to 1,413 _06224 H281DRAFT_06225: H281DRAFT_06225 - Anaerobic selenocysteine-containing dehydrogenase, at 2,028 to 3,905 _06225 H281DRAFT_06226: H281DRAFT_06226 - long-chain acyl-CoA synthetase, at 4,060 to 5,733 _06226 H281DRAFT_06227: H281DRAFT_06227 - Outer membrane protein (porin), at 5,931 to 7,106 _06227 H281DRAFT_06228: H281DRAFT_06228 - ubiquinone biosynthesis monooxygenase Coq7, at 7,409 to 8,047 _06228
Group Condition H281DRAFT_06224 H281DRAFT_06225 H281DRAFT_06226 H281DRAFT_06227 H281DRAFT_06228
carbon source Dodecandioic (C) +0.4 -0.1 -4.8 -0.2 N.D.
carbon source Sebacic (C) +0.4 +0.1 -0.7 -0.5 N.D.
carbon source Hexanoic (C) +0.1 +0.1 -1.1 +0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.6 +0.1 -1.3 -0.1 N.D.
carbon source Hexanoic (C) +0.4 +0.2 -1.3 +0.4 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.2 +0.1 -0.5 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +0.0 -0.3 -0.3 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 +0.1 +0.0 -0.5 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.2 +0.1 -0.3 N.D.
carbon source 2-furoic (C) +0.4 -0.0 -0.2 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.2 +0.1 -0.3 N.D.
carbon source Protocatechuic Acid (C) +0.5 +0.2 -0.4 +0.0 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +0.1 -0.1 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.2 -0.1 -0.2 N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.2 +0.2 -0.4 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.5 +0.1 +0.1 -0.2 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.5 +0.2 +0.1 -0.3 N.D.
carbon source D,L-Lactate (C) -0.1 +0.2 +0.3 +0.2 N.D.
carbon source D-Glucose (C) -0.1 +0.2 +0.2 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.2 +0.1 -0.2 N.D.
carbon source Malonic (C) +0.3 +0.2 -0.0 +0.3 N.D.
carbon source D-Galactose (C) +0.3 +0.2 +0.1 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.2 +0.3 -0.1 N.D.
carbon source Malonic (C) +0.6 -0.1 +0.1 +0.3 N.D.
phage Bu1_100 +0.2 -0.2 +0.4 +0.5 N.D.
carbon source Phenylacetic (C) +0.6 +0.0 +0.1 +0.4 N.D.
phage Bu1_100 +0.2 +0.2 +0.3 +0.6 N.D.
phage Bu1_10 +0.1 +0.3 +0.4 +0.4 N.D.
carbon source adipate (C) -0.4 +2.0 -0.4 +0.2 N.D.
carbon source adipate (C) +0.1 +1.9 -0.3 -0.1 N.D.
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