Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06139 and H281DRAFT_06140 are separated by 265 nucleotidesH281DRAFT_06140 and H281DRAFT_06141 are separated by 665 nucleotidesH281DRAFT_06141 and H281DRAFT_06142 are separated by 58 nucleotidesH281DRAFT_06142 and H281DRAFT_06143 are separated by 308 nucleotides H281DRAFT_06139: H281DRAFT_06139 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 30,517 to 31,473 _06139 H281DRAFT_06140: H281DRAFT_06140 - LysR substrate binding domain-containing protein, at 31,739 to 31,948 _06140 H281DRAFT_06141: H281DRAFT_06141 - hypothetical protein, at 32,614 to 32,907 _06141 H281DRAFT_06142: H281DRAFT_06142 - hypothetical protein, at 32,966 to 33,337 _06142 H281DRAFT_06143: H281DRAFT_06143 - hypothetical protein, at 33,646 to 34,392 _06143
Group Condition H281DRAFT_06139 H281DRAFT_06140 H281DRAFT_06141 H281DRAFT_06142 H281DRAFT_06143
carbon source Sebacic (C) -0.0 -0.4 +0.2 -0.2 -0.6
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.0 -0.0 -0.1 -0.7
carbon source p-Coumaric (C) -0.2 -0.1 -0.3 +0.0 -0.4
carbon source propionate (C) -0.0 +0.1 -0.1 -0.1 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.0 -0.2 +0.2 -0.4
carbon source acetate (C) -0.1 -0.1 -0.6 -0.1 +0.4
carbon source Azelaic (C) -0.0 +0.1 +0.5 -0.3 -0.8
phage Bu1_10 +0.1 +0.0 +0.3 +0.2 -1.0
carbon source D-Glucose (C) +0.1 -0.4 -0.1 -0.3 +0.3
carbon source adipate (C) +0.1 +0.2 -0.3 +0.1 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.4 -0.1 -0.3 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.3 -0.5 -0.3 +0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 -0.3 +0.4 -0.2 +0.2
carbon source D-Glucose (C) +0.2 -0.4 -0.1 -0.1 +0.5
carbon source D-Glucose (C) -0.2 +0.1 +0.2 -0.3 +0.3
carbon source Malonic (C) -0.1 -0.1 -0.1 -0.1 +0.6
lb LB +0.1 -0.3 -0.1 -0.0 +0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 -0.1 +0.2 +0.6 -0.4
lb LB +0.0 +0.0 -0.3 +0.2 +0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.0 +0.3 -0.1 +0.4 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.0 +0.3 -0.4 +0.7
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 +0.2 +0.2 -0.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.4 -0.1 +0.1 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 +0.0 -0.2 +0.3 +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 +0.6 +0.1 -0.2 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.0 +0.2 +0.1 +0.5 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 +0.3 -0.2 -0.3 +1.0
phage Bu1_100 +0.1 -0.0 +0.2 +0.0 +0.7
carbon source D-Glucose 20 mM (C) +0.1 +0.2 +0.4 -0.1 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 +0.1 +0.2 +0.2 +0.5
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