Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06110 and H281DRAFT_06111 are separated by 18 nucleotidesH281DRAFT_06111 and H281DRAFT_06112 are separated by 68 nucleotidesH281DRAFT_06112 and H281DRAFT_06113 are separated by 22 nucleotidesH281DRAFT_06113 and H281DRAFT_06114 are separated by 272 nucleotides H281DRAFT_06110: H281DRAFT_06110 - 3-oxoacyl-[acyl-carrier protein] reductase, at 129,541 to 130,296 _06110 H281DRAFT_06111: H281DRAFT_06111 - Sugar phosphate permease, at 130,315 to 131,652 _06111 H281DRAFT_06112: H281DRAFT_06112 - Predicted xylanase/chitin deacetylase, at 131,721 to 132,602 _06112 H281DRAFT_06113: H281DRAFT_06113 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 132,625 to 134,001 _06113 H281DRAFT_06114: H281DRAFT_06114 - Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family, at 134,274 to 134,525 _06114
Group Condition H281DRAFT_06110 H281DRAFT_06111 H281DRAFT_06112 H281DRAFT_06113 H281DRAFT_06114
lb LB -0.1 -0.2 -0.1 -0.1 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.2 +0.2 +0.1 -1.3
carbon source Azelaic (C) -0.0 +0.3 -0.0 +0.6 -1.5
carbon source Dodecandioic (C) -0.4 +0.3 +0.0 -0.4 -0.0
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 +0.1 -0.2 +0.1 -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.3 +0.3 -0.2 +0.0 -0.4
carbon source Gallic Acid (C) +0.4 +0.0 -0.1 -0.4 -0.4
carbon source succinate (C) -0.8 +0.2 +0.0 -0.1 +0.2
carbon source D-Glucose (C) -0.0 -0.0 +0.1 +0.6 -0.7
carbon source propionate (C) +0.3 +0.2 -0.1 -0.4 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 -0.1 -0.3 +0.4 -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.1 +0.3 +0.4 -0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 -0.3 -0.3 +0.0 +0.7
carbon source butyrate (C) +0.4 -0.1 -0.1 +0.2 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.2 -0.3 +0.5 -0.6
phage Bu1_10 -0.3 +0.1 +0.4 -0.8 +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.5 -0.2 +0.0 +0.3 +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.0 -0.1 +0.6 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.4 -0.0 +0.5 -0.1
carbon source Hexanoic (C) +0.3 +0.0 -0.2 +0.6 +0.1
carbon source Hexanoic (C) -0.1 +0.2 -0.2 +0.4 +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.1 +0.1 +0.5 -0.3
carbon source Sebacic (C) +0.1 +0.4 +0.2 -0.1 +0.3
phage Bu1_100 +0.1 +0.4 +0.5 +0.1 -0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.3 +0.3 +0.0 -0.1 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.1 -0.1 +0.4 +0.4
carbon source acetate (C) +0.4 -0.2 +0.1 +0.2 +0.4
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.1 +0.3 +0.1 +0.3 +0.4
carbon source Pimelic (C) +0.3 +0.2 +0.0 +0.5 +0.3
carbon source Valeric (C) -0.1 +0.2 -0.0 +0.4 +0.9
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H281DRAFT_06111
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H281DRAFT_06113
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H281DRAFT_06114
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