Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06087 and H281DRAFT_06088 are separated by 245 nucleotidesH281DRAFT_06088 and H281DRAFT_06089 are separated by 191 nucleotidesH281DRAFT_06089 and H281DRAFT_06090 are separated by 391 nucleotidesH281DRAFT_06090 and H281DRAFT_06091 are separated by 89 nucleotides H281DRAFT_06087: H281DRAFT_06087 - Uncharacterized membrane protein, at 105,316 to 105,846 _06087 H281DRAFT_06088: H281DRAFT_06088 - Nucleoside-diphosphate-sugar epimerase, at 106,092 to 106,730 _06088 H281DRAFT_06089: H281DRAFT_06089 - hypothetical protein, at 106,922 to 107,164 _06089 H281DRAFT_06090: H281DRAFT_06090 - N-ethylmaleimide reductase, at 107,556 to 108,770 _06090 H281DRAFT_06091: H281DRAFT_06091 - Protein required for attachment to host cells, at 108,860 to 109,216 _06091
Group Condition H281DRAFT_06087 H281DRAFT_06088 H281DRAFT_06089 H281DRAFT_06090 H281DRAFT_06091
carbon source succinate (C) -0.4 +0.0 -0.9 +0.4 -0.5
carbon source Malonic (C) +0.1 +0.2 -1.5 +0.7 -0.2
carbon source Protocatechuic Acid (C) -0.3 -0.2 -0.7 +0.8 -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.1 +0.2 -0.2 -0.0 +0.5
carbon source Hexanoic (C) -0.1 -0.3 +0.2 +0.4 -0.5
carbon source acetate (C) +0.5 -0.6 -0.2 +0.2 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 -0.3 -0.5 -0.1 +0.6
carbon source Gallic Acid (C) -0.2 +0.2 -0.5 +0.4 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -0.6 +0.9 +0.1 +0.2
carbon source butyrate (C) +0.5 -0.0 -1.2 +0.7 +0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 -0.6 +0.4 +0.1 +0.3
phage Bu1_100 +0.2 +0.3 +0.2 +0.4 -0.6
carbon source Sebacic (C) +0.7 +0.4 -0.6 -0.1 +0.2
carbon source Hexanoic (C) +0.5 +0.0 -0.5 +0.4 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 +0.1 +0.4 -0.4 +0.7
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 -0.5 +0.6 +0.2 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 -0.3 +0.0 -0.1 +0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 -0.3 +0.9 +0.0 +0.4
carbon source butyrate (C) +0.5 +0.5 -1.1 +0.8 +0.2
carbon source adipate (C) +0.8 -0.4 +0.2 +0.1 +0.2
carbon source Protocatechuic Acid (C) +0.3 -0.4 +0.2 +0.6 +0.5
carbon source Valeric (C) +0.4 -0.1 +0.0 +0.1 +0.8
phage Bu1_10 -0.4 +0.3 +0.5 +0.2 +0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.2 +1.0 +0.2 +0.4
carbon source Phenylacetic (C) +0.1 +0.2 +0.2 +0.3 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.1 +0.6 +0.1 +0.2
carbon source Suberic (C) +0.5 +0.4 -0.2 +0.2 +0.6
carbon source acetate (C) +0.2 +0.4 -0.0 +0.7 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 +0.4 +0.4 -0.2 +0.8
carbon source adipate (C) +1.0 +0.5 +0.3 +0.1 +0.3
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