Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_06010 and H281DRAFT_06011 are separated by 234 nucleotidesH281DRAFT_06011 and H281DRAFT_06012 are separated by 68 nucleotidesH281DRAFT_06012 and H281DRAFT_06013 are separated by 112 nucleotidesH281DRAFT_06013 and H281DRAFT_06014 are separated by 88 nucleotides H281DRAFT_06010: H281DRAFT_06010 - hypothetical protein, at 13,441 to 13,887 _06010 H281DRAFT_06011: H281DRAFT_06011 - SSU ribosomal protein S21P, at 14,122 to 14,334 _06011 H281DRAFT_06012: H281DRAFT_06012 - hypothetical protein, at 14,403 to 15,620 _06012 H281DRAFT_06013: H281DRAFT_06013 - O-sialoglycoprotein endopeptidase, at 15,733 to 16,761 _06013 H281DRAFT_06014: H281DRAFT_06014 - GTP cyclohydrolase I, at 16,850 to 17,656 _06014
Group Condition H281DRAFT_06010 H281DRAFT_06011 H281DRAFT_06012 H281DRAFT_06013 H281DRAFT_06014
carbon source propionate (C) -0.6 -1.1 +0.2 N.D. -0.1
carbon source acetate (C) -0.1 -1.4 +0.2 N.D. -0.1
carbon source Phenylacetic (C) -0.4 +0.4 +0.0 N.D. -1.1
carbon source Pimelic (C) +0.0 -1.0 +0.4 N.D. -0.2
carbon source butyrate (C) +0.5 -0.9 +0.4 N.D. -0.5
carbon source 4-Methyl-2-oxopentanoic (C) +0.4 -1.0 +0.0 N.D. +0.1
carbon source Azelaic (C) -0.3 -0.7 +0.5 N.D. +0.2
carbon source Protocatechuic Acid (C) -0.5 +0.2 +0.3 N.D. -0.4
carbon source Phenylacetic (C) -0.4 +0.6 +0.2 N.D. -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.2 -1.1 -0.2 N.D. +0.0
carbon source Sebacic (C) -0.2 -0.6 +0.5 N.D. +0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 +0.3 -0.0 N.D. +0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.6 +0.2 N.D. -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.6 +0.6 -0.1 N.D. -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.0 -0.2 -0.1 N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.4 +0.6 +0.4 N.D. -0.0
carbon source Gallic Acid (C) +0.4 -0.4 +0.4 N.D. +0.3
carbon source Protocatechuic Acid (C) +0.4 +0.6 +0.1 N.D. -0.3
carbon source propionate (C) +0.3 +0.4 +0.4 N.D. -0.3
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.3 +0.6 +0.2 N.D. -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +0.6 -0.2 N.D. +0.4
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.3 +1.0 +0.1 N.D. -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 +0.5 +0.2 N.D. +0.1
carbon source Protocatechuic Acid (C) +0.3 +0.8 +0.2 N.D. -0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 +1.0 +0.1 N.D. +0.0
phage Bu1_100 +0.1 +0.9 +0.1 N.D. +0.4
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 +0.7 +0.1 N.D. +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.6 +0.5 +0.2 N.D. +0.4
phage Bu1_100 +0.5 +0.6 +0.0 N.D. +0.7
phage Bu1_10 +1.1 +0.3 +0.4 N.D. +0.2
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