Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05984 and H281DRAFT_05985 are separated by 45 nucleotidesH281DRAFT_05985 and H281DRAFT_05986 are separated by 463 nucleotidesH281DRAFT_05986 and H281DRAFT_05987 are separated by 272 nucleotidesH281DRAFT_05987 and H281DRAFT_05988 are separated by 425 nucleotides H281DRAFT_05984: H281DRAFT_05984 - conserved hypothetical protein, at 127,204 to 127,506 _05984 H281DRAFT_05985: H281DRAFT_05985 - Predicted integral membrane protein, at 127,552 to 128,256 _05985 H281DRAFT_05986: H281DRAFT_05986 - transcriptional regulator, TetR family, at 128,720 to 129,355 _05986 H281DRAFT_05987: H281DRAFT_05987 - Thioredoxin reductase, at 129,628 to 130,521 _05987 H281DRAFT_05988: H281DRAFT_05988 - Ubiquinone/menaquinone biosynthesis C-methylase UbiE, at 130,947 to 131,810 _05988
Group Condition H281DRAFT_05984 H281DRAFT_05985 H281DRAFT_05986 H281DRAFT_05987 H281DRAFT_05988
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -1.1 -0.4 -0.4 -0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.5 -0.3 -0.8 -0.2 N.D.
carbon source D-Glucose (C) -0.3 -0.2 -1.2 +0.0 N.D.
phage Bu1_10 +0.0 +0.2 -1.4 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.5 -0.8 +0.1 N.D.
carbon source D,L-Lactate (C) +0.4 -0.2 -1.1 -0.1 N.D.
carbon source butyrate (C) +0.8 -1.3 -0.3 -0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 -0.1 -1.2 +0.2 N.D.
ecofab LB in EcoFAB_3.5mL -1.1 +0.3 -0.2 +0.1 N.D.
phage Bu1_100 -1.1 -0.3 +0.5 +0.1 N.D.
carbon source adipate (C) +0.1 -0.8 +0.4 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.0 -1.1 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.4 +0.1 -0.8 +0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.3 -1.0 +0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -0.4 +0.5 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 -0.1 -0.3 -0.6 N.D.
phage Bu1_100 +0.7 +0.4 -1.3 -0.2 N.D.
carbon source propionate (C) +0.7 -0.4 -0.3 -0.4 N.D.
carbon source butyrate (C) +1.0 -0.1 -1.0 +0.1 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 +0.4 +0.1 +0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.1 +0.6 +0.5 +0.2 N.D.
carbon source Malonic (C) +0.6 +0.5 -0.6 -0.2 N.D.
carbon source Valeric (C) +0.5 -0.6 +0.8 -0.4 N.D.
carbon source Azelaic (C) +0.5 -0.4 +0.8 -0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 +0.4 +0.6 -0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 +0.2 +1.2 +0.0 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.3 -0.4 +1.6 -0.3 N.D.
carbon source succinate (C) +1.2 +0.1 +0.3 -0.2 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.2 -0.3 +4.6 -0.6 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 -0.1 +4.6 -0.4 N.D.
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