Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05970 and H281DRAFT_05971 are separated by 114 nucleotidesH281DRAFT_05971 and H281DRAFT_05972 are separated by 136 nucleotidesH281DRAFT_05972 and H281DRAFT_05973 are separated by 162 nucleotidesH281DRAFT_05973 and H281DRAFT_05974 overlap by 4 nucleotides H281DRAFT_05970: H281DRAFT_05970 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 112,952 to 113,554 _05970 H281DRAFT_05971: H281DRAFT_05971 - Uncharacterized membrane protein YoaK, UPF0700 family, at 113,669 to 114,481 _05971 H281DRAFT_05972: H281DRAFT_05972 - conserved hypothetical protein, at 114,618 to 114,932 _05972 H281DRAFT_05973: H281DRAFT_05973 - carbon-monoxide dehydrogenase small subunit, at 115,095 to 115,586 _05973 H281DRAFT_05974: H281DRAFT_05974 - carbon-monoxide dehydrogenase medium subunit, at 115,583 to 116,443 _05974
Group Condition H281DRAFT_05970 H281DRAFT_05971 H281DRAFT_05972 H281DRAFT_05973 H281DRAFT_05974
carbon source Malonic (C) N.D. N.D. -0.9 N.D. -1.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.7 N.D. -1.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -0.5 N.D. -1.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.2 N.D. -1.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. -0.0 N.D. -1.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. +0.5 N.D. -1.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.6 N.D. -0.5
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. +0.5 N.D. -1.6
carbon source p-Coumaric (C) N.D. N.D. +0.3 N.D. -1.4
carbon source D,L-Lactate (C) N.D. N.D. +0.2 N.D. -1.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.5 N.D. -1.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. +0.2 N.D. -0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. +0.3 N.D. -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.8 N.D. +0.4
ecofab LB in EcoFAB_3.5mL N.D. N.D. +0.4 N.D. -0.7
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. +0.5 N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.9 N.D. +1.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. -0.2 N.D. +1.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. -0.2 N.D. +1.3
carbon source succinate (C) N.D. N.D. +0.1 N.D. +0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. N.D. +0.2 N.D. +0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.1 N.D. +1.0
carbon source propionate (C) N.D. N.D. -0.1 N.D. +1.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. N.D. -0.0 N.D. +1.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. +1.1 N.D. +0.2
carbon source Glycerol (C) N.D. N.D. +0.5 N.D. +0.8
carbon source Protocatechuic Acid (C) N.D. N.D. +0.3 N.D. +1.1
carbon source Hexanoic (C) N.D. N.D. -0.3 N.D. +1.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. +0.2 N.D. +1.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -0.1 N.D. +1.7
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