Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_05953 and H281DRAFT_05954 are separated by 2 nucleotidesH281DRAFT_05954 and H281DRAFT_05955 are separated by 12 nucleotidesH281DRAFT_05955 and H281DRAFT_05956 overlap by 4 nucleotidesH281DRAFT_05956 and H281DRAFT_05957 overlap by 4 nucleotides H281DRAFT_05953: H281DRAFT_05953 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 93,233 to 94,165 _05953 H281DRAFT_05954: H281DRAFT_05954 - Sugar phosphate permease, at 94,168 to 95,490 _05954 H281DRAFT_05955: H281DRAFT_05955 - Predicted arabinose efflux permease, MFS family, at 95,503 to 96,741 _05955 H281DRAFT_05956: H281DRAFT_05956 - Predicted arabinose efflux permease, MFS family, at 96,738 to 98,018 _05956 H281DRAFT_05957: H281DRAFT_05957 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 98,015 to 99,010 _05957
Group Condition H281DRAFT_05953 H281DRAFT_05954 H281DRAFT_05955 H281DRAFT_05956 H281DRAFT_05957
carbon source 4-Hydroxybenzoic Acid (C) -1.0 -0.2 -0.9 -0.3 N.D.
carbon source L-Glutamic (C) -1.0 -0.4 -0.6 -0.3 N.D.
phage Bu1_10 -1.3 -0.6 -0.1 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 +0.0 +0.3 -1.2 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) -0.2 +0.2 -0.8 -0.5 N.D.
carbon source Hydroxy-L-Proline (C) +0.0 +0.1 -0.3 -0.9 N.D.
carbon source Hexanoic (C) -0.6 +0.2 +0.5 -1.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.0 +0.2 -0.7 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.8 +0.0 -0.5 +0.4 N.D.
carbon source Malonic (C) -0.7 +0.0 +0.2 -0.4 N.D.
carbon source Sebacic (C) -0.4 +0.0 +0.3 -0.4 N.D.
carbon source adipate (C) +0.2 -0.3 +0.2 -0.6 N.D.
carbon source p-Coumaric (C) -0.3 +0.1 -0.6 +0.4 N.D.
carbon source acetate (C) -0.7 +0.2 +0.4 -0.2 N.D.
carbon source adipate (C) +0.4 -0.1 +0.7 -1.3 N.D.
carbon source Protocatechuic Acid (C) -0.2 -0.2 +0.5 -0.2 N.D.
carbon source p-Coumaric (C) +0.3 +0.2 -0.2 -0.5 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.4 -0.2 +0.0 +0.6 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.7 -0.1 -0.6 +0.1 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 +0.1 -0.3 +0.7 N.D.
phage Bu1_100 +0.6 -0.4 +0.5 -0.3 N.D.
carbon source succinate (C) +0.6 +0.3 +0.4 -0.8 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.8 +0.3 +0.0 -0.4 N.D.
carbon source Pimelic (C) -0.2 -0.0 +0.5 +0.6 N.D.
carbon source Azelaic (C) +0.2 -0.2 +0.3 +0.7 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 +0.2 +0.3 +0.7 N.D.
carbon source propionate (C) +0.5 -0.2 +0.7 +0.1 N.D.
carbon source Suberic (C) +0.1 +0.1 +0.7 +0.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 +0.1 +0.4 +0.3 N.D.
phage Bu1_100 +0.1 +0.3 +1.0 +0.2 N.D.
remove
H281DRAFT_05953
plot		 remove
H281DRAFT_05954
plot		 remove
H281DRAFT_05955		 remove
H281DRAFT_05956
plot		 remove
H281DRAFT_05957
plot