Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_05938 and H281DRAFT_05939 are separated by 158 nucleotidesH281DRAFT_05939 and H281DRAFT_05940 are separated by 46 nucleotidesH281DRAFT_05940 and H281DRAFT_05941 are separated by 36 nucleotidesH281DRAFT_05941 and H281DRAFT_05942 are separated by 99 nucleotides H281DRAFT_05938: H281DRAFT_05938 - hypothetical protein, at 77,940 to 78,152 _05938 H281DRAFT_05939: H281DRAFT_05939 - Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain, at 78,311 to 79,264 _05939 H281DRAFT_05940: H281DRAFT_05940 - polysaccharide transporter, PST family, at 79,311 to 80,615 _05940 H281DRAFT_05941: H281DRAFT_05941 - Glycosyltransferase involved in cell wall bisynthesis, at 80,652 to 81,611 _05941 H281DRAFT_05942: H281DRAFT_05942 - transcriptional regulator, LysR family, at 81,711 to 82,562 _05942
Group Condition H281DRAFT_05938 H281DRAFT_05939 H281DRAFT_05940 H281DRAFT_05941 H281DRAFT_05942
carbon source Hexanoic (C) N.D. N.D. N.D. N.D. -0.6
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. N.D. -0.4
carbon source propionate (C) N.D. N.D. N.D. N.D. -0.4
carbon source Valeric (C) N.D. N.D. N.D. N.D. -0.4
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. -0.4
carbon source D-Galactose (C) N.D. N.D. N.D. N.D. -0.4
carbon source Glycerol (C) N.D. N.D. N.D. N.D. -0.3
carbon source Hexanoic (C) N.D. N.D. N.D. N.D. -0.3
carbon source Suberic (C) N.D. N.D. N.D. N.D. -0.3
carbon source adipate (C) N.D. N.D. N.D. N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. N.D. N.D. +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. N.D. N.D. +0.3
carbon source D-Glucose 20 mM (C) N.D. N.D. N.D. N.D. +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. N.D. N.D. +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. N.D. +0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. N.D. N.D. +0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. N.D. N.D. +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. N.D. N.D. N.D. +0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. N.D. N.D. +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. N.D. N.D. N.D. +0.5
carbon source succinate (C) N.D. N.D. N.D. N.D. +0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. N.D. +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +0.5
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. N.D. N.D. +0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. N.D. N.D. +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +1.0
remove
H281DRAFT_05938
plot		 remove
H281DRAFT_05939
plot		 remove
H281DRAFT_05940		 remove
H281DRAFT_05941
plot		 remove
H281DRAFT_05942
plot