Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05832 and H281DRAFT_05833 are separated by 216 nucleotidesH281DRAFT_05833 and H281DRAFT_05834 are separated by 78 nucleotidesH281DRAFT_05834 and H281DRAFT_05835 are separated by 133 nucleotidesH281DRAFT_05835 and H281DRAFT_05836 are separated by 67 nucleotides H281DRAFT_05832: H281DRAFT_05832 - hypothetical protein, at 108,810 to 109,022 _05832 H281DRAFT_05833: H281DRAFT_05833 - hypothetical protein, at 109,239 to 109,517 _05833 H281DRAFT_05834: H281DRAFT_05834 - hypothetical protein, at 109,596 to 110,402 _05834 H281DRAFT_05835: H281DRAFT_05835 - 3-hydroxyisobutyrate dehydrogenase, at 110,536 to 111,405 _05835 H281DRAFT_05836: H281DRAFT_05836 - Threonine/homoserine/homoserine lactone efflux protein, at 111,473 to 112,120 _05836
Group Condition H281DRAFT_05832 H281DRAFT_05833 H281DRAFT_05834 H281DRAFT_05835 H281DRAFT_05836
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. +0.2 -1.6 -0.2
carbon source Malonic (C) N.D. N.D. -0.1 -1.1 +0.3
lb LB N.D. N.D. -0.1 -0.7 -0.2
carbon source succinate (C) N.D. N.D. -0.1 -0.6 -0.1
carbon source D-Glucose (C) N.D. N.D. -0.3 -0.3 -0.3
carbon source acetate (C) N.D. N.D. -0.3 -0.6 +0.2
carbon source D-Glucose (C) N.D. N.D. -0.4 -0.5 +0.1
carbon source p-Coumaric (C) N.D. N.D. +0.1 -0.6 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. +0.0 -0.7 -0.1
carbon source butyrate (C) N.D. N.D. -0.2 +0.4 -0.8
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. -0.3 -0.4 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.2 -0.6 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.2 +0.2 -0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. +0.2 -0.6 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. +0.0 +0.4 -0.4
carbon source D-Glucose 20 mM (C) N.D. N.D. -0.3 +0.2 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. -0.3 +0.3 +0.3
carbon source Hexanoic (C) N.D. N.D. +0.2 -0.3 +0.4
carbon source adipate (C) N.D. N.D. -0.2 +0.4 +0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. N.D. -0.3 +0.6 +0.2
phage Bu1_10 N.D. N.D. +0.5 +0.5 -0.4
phage Bu1_100 N.D. N.D. -0.2 +0.3 +0.5
carbon source propionate (C) N.D. N.D. -0.1 +0.4 +0.4
carbon source 4-Methyl-2-oxopentanoic (C) N.D. N.D. +0.3 +0.3 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. -0.2 +0.6 +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.4 +0.3 +0.2
carbon source Phenylacetic (C) N.D. N.D. +0.1 +0.9 +0.0
ecofab LB in EcoFAB_3.5mL N.D. N.D. +0.1 +0.5 +0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. +0.2 +0.4 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.2 +0.4 +0.4
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H281DRAFT_05833
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