Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05813 and H281DRAFT_05814 are separated by 201 nucleotidesH281DRAFT_05814 and H281DRAFT_05815 are separated by 97 nucleotidesH281DRAFT_05815 and H281DRAFT_05816 are separated by 116 nucleotidesH281DRAFT_05816 and H281DRAFT_05817 are separated by 81 nucleotides H281DRAFT_05813: H281DRAFT_05813 - sensor histidine kinase inhibitor, KipI family, at 90,151 to 90,804 _05813 H281DRAFT_05814: H281DRAFT_05814 - Predicted transcription regulator, contains HTH domain, MarR family, at 91,006 to 91,518 _05814 H281DRAFT_05815: H281DRAFT_05815 - 5,10-methenyltetrahydrofolate synthetase, at 91,616 to 92,158 _05815 H281DRAFT_05816: H281DRAFT_05816 - soluble lytic murein transglycosylase, at 92,275 to 94,203 _05816 H281DRAFT_05817: H281DRAFT_05817 - NADH dehydrogenase, at 94,285 to 95,238 _05817
Group Condition H281DRAFT_05813 H281DRAFT_05814 H281DRAFT_05815 H281DRAFT_05816 H281DRAFT_05817
carbon source 2-Deoxy-D-Ribose (C) +0.0 -1.8 -6.4 +0.3 -0.6
carbon source 2-Deoxy-D-Ribose (C) +0.3 -1.5 -6.4 +0.3 -0.5
carbon source 2-Deoxy-D-Ribose (C) -0.0 -1.3 -6.0 +0.3 -0.7
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.2 -1.3 -5.1 +0.2 -0.6
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.0 -1.1 -5.4 +0.1 -0.6
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 -1.2 -5.3 +0.2 -0.4
carbon source propionate (C) -0.0 -0.8 -5.2 -0.2 -0.0
carbon source 2-Deoxy-D-Ribose (C) +0.2 -1.5 -4.3 +0.2 -0.4
carbon source Protocatechuic Acid (C) +0.1 -1.2 -4.6 +0.2 -0.0
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.2 -0.9 -3.9 +0.1 -0.5
carbon source Dodecandioic (C) -0.3 -1.4 -3.6 +0.0 -0.1
carbon source propionate (C) +0.1 -1.2 -3.3 -0.3 -0.2
carbon source Valeric (C) +0.1 -0.9 -3.7 -0.1 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 -1.1 -3.3 +0.4 -0.5
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.1 -0.9 -3.2 +0.1 -0.4
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -0.1 -1.4 +0.2 -1.5
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 -0.6 -3.4 +0.2 -0.1
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 +0.0 -1.2 +0.2 -1.7
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 -1.7 -3.1 +1.1 -0.5
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 -1.7 -3.5 +1.0 -0.2
carbon source 3-Hydroxypropionate (C) +0.1 +0.1 -3.5 +0.2 -0.5
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 -1.8 -2.3 +1.0 -0.5
carbon source 4-Methyl-2-oxopentanoic (C) +0.3 -0.5 -3.6 +0.5 +0.0
carbon source D,L-Lactate (C) -0.3 +0.3 -3.1 +0.4 -0.5
carbon source 2'-Deoxyinosine 10 mM (C) +0.5 -1.7 -2.3 +1.0 -0.4
carbon source 4-Methyl-2-oxopentanoic (C) +0.3 -0.6 -2.8 +0.5 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 -0.8 -2.6 +1.1 +0.2
carbon source Phenylacetic (C) +1.8 -2.6 -1.6 +1.4 -0.2
carbon source Phenylacetic (C) +1.8 -1.8 -1.4 +1.4 -0.3
carbon source 4-Hydroxybenzoic Acid (C) +3.3 -1.9 -1.1 +2.2 +0.1
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