Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

Group	Condition	H281DRAFT_05802	H281DRAFT_05803	H281DRAFT_05804	H281DRAFT_05805	H281DRAFT_05806
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.2	-0.9	-1.2	-0.9	-1.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.9	-1.2	-0.7	-1.0	-1.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.3	-0.8	-0.7	-0.4	-0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.4	-0.6	-0.6	-0.2	-0.6
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.3	-0.9	-0.5	-0.0	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.3	-0.5	-0.2	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-0.4	-0.6	-0.1	-0.6
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.2	-0.5	-0.1	-0.2	-0.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.2	-0.2	-0.6	-0.2	-0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.1	-0.3	-0.5	-0.2	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.3	-0.6	+0.1	-0.1	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-0.3	-0.3	-0.3	-0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM	-0.3	-0.7	-0.2	-0.1	-0.2
carbon source	Pimelic (C)	-0.0	-0.1	-0.5	-0.1	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	+0.2	-0.4	-0.4	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.2	-0.2	-0.5	-0.5
carbon source	adipate (C)	+0.0	-0.2	-0.7	-0.3	+0.2
carbon source	Suberic (C)	+0.0	+0.0	+0.2	-0.4	-0.7
carbon source	Sebacic (C)	+0.1	-0.3	+0.2	+0.4	+0.3
carbon source	2-Deoxy-D-Ribose (C)	+0.3	-0.2	+0.4	+0.3	+0.2
phage	Bu1_100	+0.4	-0.4	+0.7	+0.2	+0.4
carbon source	2'-Deoxyinosine 10 mM (C)	+0.3	+0.2	+0.2	+0.4	+0.1
carbon source	4-Hydroxybenzoic Acid (C)	+0.2	+0.2	+0.1	+0.5	+0.4
phage	Bu1_100	+0.4	+0.2	+0.3	+0.5	+0.1
carbon source	3-Hydroxypropionate (C)	+0.3	+0.4	+0.3	+0.2	+0.3
carbon source	2'-Deoxyinosine 5 mM (C)	+0.1	+0.4	+0.6	+0.2	+0.2
carbon source	2'-Deoxyinosine 10 mM (C)	+0.3	+0.4	+0.5	+0.3	+0.1
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	+0.3	+0.6	+0.6	+0.4	+0.1
carbon source	Phenylacetic (C)	+0.7	+0.5	+0.1	+0.8	+0.4
carbon source	Phenylacetic (C)	+0.6	+0.9	+0.5	+0.9	+0.6