Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05789 and H281DRAFT_05790 are separated by 67 nucleotidesH281DRAFT_05790 and H281DRAFT_05791 overlap by 1 nucleotidesH281DRAFT_05791 and H281DRAFT_05792 are separated by 35 nucleotidesH281DRAFT_05792 and H281DRAFT_05793 are separated by 125 nucleotides H281DRAFT_05789: H281DRAFT_05789 - flagellar protein FliT, at 62,249 to 62,575 _05789 H281DRAFT_05790: H281DRAFT_05790 - hook-length control protein FliK, at 62,643 to 64,112 _05790 H281DRAFT_05791: H281DRAFT_05791 - flagellar biosynthesis protein, at 64,112 to 64,471 _05791 H281DRAFT_05792: H281DRAFT_05792 - coniferyl-aldehyde dehydrogenase, at 64,507 to 65,925 _05792 H281DRAFT_05793: H281DRAFT_05793 - putative acyl-CoA dehydrogenase, at 66,051 to 67,736 _05793
Group Condition H281DRAFT_05789 H281DRAFT_05790 H281DRAFT_05791 H281DRAFT_05792 H281DRAFT_05793
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.7 -0.6 -0.2 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.7 -0.1 -0.3 -0.0
phage Bu1_100 N.D. -0.1 -0.3 -0.3 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.5 -0.4 -0.1 -0.2
carbon source D-Glucose 20 mM (C) N.D. -0.7 +0.1 -0.2 -0.3
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.6 -0.3 -0.2 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.8 -0.2 +0.1 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.7 -0.4 -0.0 +0.3
carbon source D-Glucose (C) N.D. -0.5 +0.2 -0.4 -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -0.5 -0.3 -0.1 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. -0.4 +0.2 -0.1 -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.8 +0.3 -0.3 +0.0
carbon source Hexanoic (C) N.D. -0.1 -0.9 +0.2 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.7 -0.2 +0.0 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.6 +0.4 -0.2 -0.1
carbon source Azelaic (C) N.D. +0.3 +0.0 -0.3 -0.5
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -0.6 -0.1 -0.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.2 -0.1 +0.5 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.4 -0.3 +0.4 +0.1
carbon source butyrate (C) N.D. -0.2 -0.4 +0.0 +0.5
carbon source Malonic (C) N.D. -0.4 -0.2 +0.1 +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.2 +0.3 +0.3 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.2 -0.3 -0.3 +0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.8 +0.6 -0.2 +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 -0.4 -0.2 +0.7
carbon source 3-Hydroxypropionate (C) N.D. -0.4 +0.5 +0.1 +0.2
phage Bu1_100 N.D. +0.2 +0.1 -0.2 +0.5
carbon source acetate (C) N.D. -0.2 +0.1 +0.4 +0.4
ecofab LB in EcoFAB_3.5mL N.D. -0.1 +0.8 -0.1 +0.3
carbon source acetate (C) N.D. +0.4 -0.4 +0.4 +0.6
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