Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05786 and H281DRAFT_05787 are separated by 236 nucleotidesH281DRAFT_05787 and H281DRAFT_05788 are separated by 239 nucleotidesH281DRAFT_05788 and H281DRAFT_05789 overlap by 4 nucleotidesH281DRAFT_05789 and H281DRAFT_05790 are separated by 67 nucleotides H281DRAFT_05786: H281DRAFT_05786 - flagellar M-ring protein FliF, at 59,192 to 60,991 _05786 H281DRAFT_05787: H281DRAFT_05787 - flagellar hook-basal body complex protein FliE, at 61,228 to 61,578 _05787 H281DRAFT_05788: H281DRAFT_05788 - flagellar protein FliS, at 61,818 to 62,252 _05788 H281DRAFT_05789: H281DRAFT_05789 - flagellar protein FliT, at 62,249 to 62,575 _05789 H281DRAFT_05790: H281DRAFT_05790 - hook-length control protein FliK, at 62,643 to 64,112 _05790
Group Condition H281DRAFT_05786 H281DRAFT_05787 H281DRAFT_05788 H281DRAFT_05789 H281DRAFT_05790
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 N.D. -2.8 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 N.D. -3.0 N.D. +0.1
ecofab LB in EcoFAB_3.5mL -0.6 N.D. -1.2 N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 N.D. -0.4 N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 N.D. -2.0 N.D. -0.2
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 N.D. -0.4 N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 N.D. -1.8 N.D. -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 N.D. -1.5 N.D. -0.2
carbon source D-Glucose (C) +0.4 N.D. -0.6 N.D. -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.5 N.D. -0.6 N.D. -0.5
carbon source D-Glucose 20 mM (C) +0.5 N.D. -0.3 N.D. -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM +0.4 N.D. -0.5 N.D. -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.0 N.D. -0.8 N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4 N.D. -1.3 N.D. -0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 N.D. -0.2 N.D. -0.6
carbon source D-Glucose (C) +0.5 N.D. -0.4 N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) +0.6 N.D. -0.4 N.D. -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.8 N.D. -1.3 N.D. +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 N.D. +0.3 N.D. -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.0 N.D. -0.6 N.D. -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.0 N.D. -1.2 N.D. +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.5 N.D. -0.5 N.D. +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.9 N.D. -0.1 N.D. -0.5
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +1.3 N.D. -0.5 N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.9 N.D. -0.8 N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.0 N.D. -1.2 N.D. -0.3
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 N.D. -0.6 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.8 N.D. -0.8 N.D. -0.4
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 N.D. -0.6 N.D. +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.3 N.D. -0.4 N.D. +0.1
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