Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_05742	H281DRAFT_05743	H281DRAFT_05744	H281DRAFT_05745	H281DRAFT_05746
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.0	-1.9	-1.1	-1.4	-3.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0	-1.7	-0.8	-0.9	-1.7
carbon source	4-Hydroxybenzoic Acid (C)	-1.0	-3.2	+0.1	-0.6	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.5	-0.8	-0.4	-0.7	-1.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	-1.0	-0.3	-0.5	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0	-0.3	-0.6	-0.3	-0.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.3	-0.3	-0.9	-0.5	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8	-0.1	+0.0	-0.7	-0.7
phage	Bu1_10	-0.8	-1.2	-0.6	-0.0	+0.3
carbon source	D-Glucose (C)	-0.5	-1.0	-0.5	-0.2	+0.1
phage	Bu1_100	-0.4	-0.1	-1.7	+0.2	+0.1
carbon source	Protocatechuic Acid (C)	-0.8	-0.6	+0.1	-0.1	-0.2
carbon source	Protocatechuic Acid (C)	-0.5	-0.6	+0.2	-0.5	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.2	-1.0	+0.0	-0.4	-0.4
carbon source	Valeric (C)	+0.0	-1.5	+0.2	-0.1	-0.1
carbon source	Phenylacetic (C)	-0.6	-0.4	+0.4	-0.2	-0.5
carbon source	Protocatechuic Acid (C)	-0.9	-0.3	+0.4	-0.2	-0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.4	+0.3	-1.2	+0.0	-0.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.5	+0.3	-0.7	+0.0	-1.1
carbon source	Malonic (C)	+0.5	+0.1	-0.3	-0.2	-0.8
carbon source	propionate (C)	-0.3	-0.7	+0.8	-0.0	-0.2
carbon source	D-Glucose (C)	-0.1	+0.8	-0.8	-0.0	-0.0
carbon source	Hexanoic (C)	-0.2	-0.9	+1.0	-0.1	+0.1
carbon source	adipate (C)	+0.0	-0.4	+1.0	+0.3	-0.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.7	+0.5	-0.0	-0.0	-0.6
carbon source	2-Deoxy-D-Ribose (C)	-0.1	+0.9	-0.5	+0.0	+0.4
	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.7	+0.6	+0.4	+0.2	-0.6
phage	Bu1_100	-0.2	+0.8	+0.9	-0.2	+0.8
carbon source	acetate (C)	+0.3	+0.6	+1.0	-0.0	+0.5
ecofab	LB in EcoFAB_3.5mL	+0.7	+0.6	+0.6	+0.9	+0.4