Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05730 and H281DRAFT_05731 are separated by 136 nucleotidesH281DRAFT_05731 and H281DRAFT_05732 are separated by 126 nucleotidesH281DRAFT_05732 and H281DRAFT_05733 are separated by 129 nucleotidesH281DRAFT_05733 and H281DRAFT_05734 are separated by 466 nucleotides H281DRAFT_05730: H281DRAFT_05730 - DNA-3-methyladenine glycosylase I, at 3,295 to 3,891 _05730 H281DRAFT_05731: H281DRAFT_05731 - glucosamine kinase, at 4,028 to 4,918 _05731 H281DRAFT_05732: H281DRAFT_05732 - hypothetical protein, at 5,045 to 5,866 _05732 H281DRAFT_05733: H281DRAFT_05733 - PXPV repeat-containing protein, at 5,996 to 6,307 _05733 H281DRAFT_05734: H281DRAFT_05734 - aquaporin Z, at 6,774 to 7,514 _05734
Group Condition H281DRAFT_05730 H281DRAFT_05731 H281DRAFT_05732 H281DRAFT_05733 H281DRAFT_05734
carbon source 2-furoic (C) +0.1 -0.1 -0.3 -0.5 -0.3
carbon source Malonic (C) -0.2 -0.4 -0.2 +0.1 -0.4
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 +0.0 -0.4 -0.1 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.2 -0.3 +0.1 -0.3
carbon source Malonic (C) -0.1 -0.1 -0.2 +0.1 -0.5
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.2 -0.2 +0.1 -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.4 -0.1 +0.2 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 -0.3 -0.4 -0.3 +0.1
carbon source D-Galactose (C) +0.0 +0.0 -0.4 -0.4 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.1 -0.2 +0.0 +0.3 -0.6
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 -0.1 -0.2 -0.3 +0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.3 -0.4 -0.7 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.1 -0.1 -0.3 -0.3 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.2 -0.1 -0.0 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 +0.1 -0.2 -0.4 +0.2
carbon source Malonic (C) +0.4 -0.1 -0.2 -0.0 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 -0.3 -0.3 +0.1 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.2 +0.1 -0.2 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.1 +0.4 -0.1 -0.2 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 +0.5 +0.0 -0.2 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +0.1 -0.4 -0.1 +0.2
carbon source acetate (C) +0.4 +0.2 -0.3 +0.2 -0.3
carbon source Valeric (C) +0.3 -0.2 +0.2 +0.2 -0.2
carbon source Azelaic (C) +0.5 -0.2 +0.2 -0.3 +0.1
ecofab LB in EcoFAB_3.5mL +0.2 +0.3 -0.1 -0.2 +0.2
carbon source Sebacic (C) -0.2 +0.4 -0.1 +0.3 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.1 -0.2 +0.2 +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 -0.0 +0.1 +0.0 -0.1
carbon source butyrate (C) +0.3 +0.1 +0.1 +0.4 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.2 +0.5 +0.1 +0.4
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