Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05680 and H281DRAFT_05681 are separated by 212 nucleotidesH281DRAFT_05681 and H281DRAFT_05682 are separated by 151 nucleotidesH281DRAFT_05682 and H281DRAFT_05683 are separated by 155 nucleotidesH281DRAFT_05683 and H281DRAFT_05684 are separated by 70 nucleotides H281DRAFT_05680: H281DRAFT_05680 - hypothetical protein, at 96,232 to 96,786 _05680 H281DRAFT_05681: H281DRAFT_05681 - transcriptional regulator, TetR family, at 96,999 to 97,667 _05681 H281DRAFT_05682: H281DRAFT_05682 - Sugar phosphate permease, at 97,819 to 99,102 _05682 H281DRAFT_05683: H281DRAFT_05683 - Nitroreductase, at 99,258 to 99,851 _05683 H281DRAFT_05684: H281DRAFT_05684 - Predicted arabinose efflux permease, MFS family, at 99,922 to 101,397 _05684
Group Condition H281DRAFT_05680 H281DRAFT_05681 H281DRAFT_05682 H281DRAFT_05683 H281DRAFT_05684
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -1.6 -0.1 -0.3 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.7 +0.0 -0.0 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 -1.7 +0.3 -0.1 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 -1.3 +0.1 -0.4 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.0 -1.7 +0.2 -0.1 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.3 +0.0 -0.2 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -1.7 -0.0 +0.2 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.0 -1.5 +0.0 -0.0 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -1.3 +0.1 -0.0 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.0 -2.1 +0.2 +0.3 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -1.4 +0.2 -0.3 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -1.2 +0.1 +0.1 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -1.0 -0.0 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 -1.0 +0.1 -0.0 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.9 +0.1 +0.1 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.9 +0.1 +0.0 +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.1 -1.3 +0.2 +0.2 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.1 -0.8 +0.0 -0.1 +0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 -0.8 +0.1 +0.2 -0.1
carbon source D-Galactose (C) -0.1 -0.7 +0.1 -0.3 +0.2
carbon source adipate (C) +0.1 -1.1 +0.1 +0.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.4 -1.1 -0.1 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.2 -0.7 +0.1 +0.2 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.1 -1.0 +0.1 +0.2 +0.1
carbon source succinate (C) +0.2 -1.2 +0.2 +0.2 +0.1
carbon source adipate (C) +0.0 -1.0 +0.1 +0.3 +0.2
carbon source Azelaic (C) +0.0 -0.8 +0.1 +0.4 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.1 -0.4 -0.0 +0.3 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 -0.5 -0.0 +0.3 +0.3
phage Bu1_10 +0.5 +0.4 +0.2 +0.1 +0.1
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