Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05673 and H281DRAFT_05674 are separated by 19 nucleotidesH281DRAFT_05674 and H281DRAFT_05675 are separated by 368 nucleotidesH281DRAFT_05675 and H281DRAFT_05676 are separated by 31 nucleotidesH281DRAFT_05676 and H281DRAFT_05677 are separated by 796 nucleotides H281DRAFT_05673: H281DRAFT_05673 - stringent starvation protein B, at 90,123 to 90,641 _05673 H281DRAFT_05674: H281DRAFT_05674 - tRNA_Thr_TGT, at 90,661 to 90,736 _05674 H281DRAFT_05675: H281DRAFT_05675 - Methylase of polypeptide chain release factors, at 91,105 to 92,232 _05675 H281DRAFT_05676: H281DRAFT_05676 - hypothetical protein, at 92,264 to 93,559 _05676 H281DRAFT_05677: H281DRAFT_05677 - Protein of unknown function (DUF1059), at 94,356 to 94,565 _05677
Group Condition H281DRAFT_05673 H281DRAFT_05674 H281DRAFT_05675 H281DRAFT_05676 H281DRAFT_05677
phage Bu1_100 -0.8 N.D. -0.4 -0.3 N.D.
carbon source butyrate (C) -0.3 N.D. -0.1 -0.3 N.D.
carbon source Malonic (C) -0.4 N.D. -0.1 +0.1 N.D.
carbon source D-Glucose (C) -0.5 N.D. -0.1 +0.2 N.D.
phage Bu1_100 -0.4 N.D. -0.1 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 N.D. +0.1 +0.2 N.D.
phage Bu1_10 -0.1 N.D. -0.2 +0.3 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.3 N.D. -0.1 -0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 N.D. -0.3 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. +0.2 +0.1 N.D.
carbon source succinate (C) -0.2 N.D. +0.2 +0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 N.D. +0.1 -0.2 N.D.
carbon source Sebacic (C) -0.2 N.D. +0.3 +0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.5 N.D. -0.1 -0.1 N.D.
carbon source D-Glucose 20 mM (C) +0.4 N.D. +0.2 -0.1 N.D.
carbon source Azelaic (C) +0.3 N.D. +0.3 -0.1 N.D.
carbon source Protocatechuic Acid (C) +0.4 N.D. -0.1 +0.2 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.6 N.D. -0.0 -0.1 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 N.D. +0.2 -0.3 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 N.D. -0.1 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.5 N.D. +0.1 -0.0 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 N.D. +0.2 -0.0 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 N.D. +0.3 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 N.D. +0.2 +0.3 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.2 N.D. +0.3 +0.1 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.3 N.D. +0.3 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 N.D. +0.2 +0.0 N.D.
ecofab LB in EcoFAB_3.5mL +0.4 N.D. +0.3 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 N.D. +0.2 +0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.5 N.D. +0.1 +0.2 N.D.
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