Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05492 and H281DRAFT_05493 are separated by 12 nucleotidesH281DRAFT_05493 and H281DRAFT_05494 are separated by 169 nucleotidesH281DRAFT_05494 and H281DRAFT_05495 are separated by 79 nucleotidesH281DRAFT_05495 and H281DRAFT_05496 are separated by 53 nucleotides H281DRAFT_05492: H281DRAFT_05492 - putative spermidine/putrescine transport system ATP-binding protein, at 71,320 to 72,438 _05492 H281DRAFT_05493: H281DRAFT_05493 - 4-aminobutyrate---pyruvate transaminase, at 72,451 to 73,839 _05493 H281DRAFT_05494: H281DRAFT_05494 - DNA-binding transcriptional regulator, GntR family, at 74,009 to 74,650 _05494 H281DRAFT_05495: H281DRAFT_05495 - putative spermidine/putrescine transport system substrate-binding protein, at 74,730 to 75,770 _05495 H281DRAFT_05496: H281DRAFT_05496 - Acetoin utilization deacetylase AcuC, at 75,824 to 76,849 _05496
Group Condition H281DRAFT_05492 H281DRAFT_05493 H281DRAFT_05494 H281DRAFT_05495 H281DRAFT_05496
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 +0.0 -2.6 -0.4 -0.2
carbon source Valeric (C) -0.0 +0.0 -3.1 +0.2 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.1 -2.8 +0.0 +0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 -0.2 -2.6 +0.0 +0.1
carbon source D-Galactose (C) -0.2 -0.1 -2.1 +0.0 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.2 -2.1 -0.1 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.1 -2.2 +0.0 -0.1
carbon source acetate (C) -0.0 +0.1 -2.6 +0.2 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.0 +0.1 -2.2 +0.0 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 +0.0 -2.0 +0.1 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.2 -2.1 -0.1 -0.0
carbon source D-Glucose (C) -0.1 -0.1 -1.8 +0.0 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.1 -2.4 -0.0 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.0 -2.0 +0.1 -0.0
carbon source Phenylacetic (C) -0.2 -0.3 -1.5 +0.0 +0.1
carbon source 3-hydroxybutyric (C) -0.0 +0.1 -1.9 +0.0 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.0 -1.7 +0.0 -0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 -0.2 -1.7 -0.0 +0.2
carbon source Glycerol (C) -0.2 -0.2 -1.4 +0.1 +0.1
carbon source acetate (C) +0.0 +0.0 -1.7 +0.0 +0.0
carbon source adipate (C) -0.0 +0.4 -2.2 +0.2 +0.2
carbon source Hexanoic (C) -0.2 +0.3 -1.2 -0.1 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.2 -1.6 +0.5 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.2 -1.6 +0.1 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.1 -1.6 +0.1 +0.1
carbon source Protocatechuic Acid (C) +0.0 +0.1 -1.2 +0.2 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 +0.2 -1.1 +0.3 -0.0
carbon source Dodecandioic (C) +0.3 +0.5 -1.5 +0.0 +0.1
carbon source Protocatechuic Acid (C) +0.0 +0.3 -1.2 +0.2 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -0.2 +1.3 +0.0 +0.1
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