Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05482 and H281DRAFT_05483 are separated by 64 nucleotidesH281DRAFT_05483 and H281DRAFT_05484 are separated by 1075 nucleotidesH281DRAFT_05484 and H281DRAFT_05485 are separated by 265 nucleotidesH281DRAFT_05485 and H281DRAFT_05486 are separated by 541 nucleotides H281DRAFT_05482: H281DRAFT_05482 - hypothetical protein, at 62,099 to 62,488 _05482 H281DRAFT_05483: H281DRAFT_05483 - protein of unknown function (DUF1840), at 62,553 to 62,870 _05483 H281DRAFT_05484: H281DRAFT_05484 - Nucleotide-binding universal stress protein, UspA family, at 63,946 to 64,428 _05484 H281DRAFT_05485: H281DRAFT_05485 - Group II intron, maturase-specific domain, at 64,694 to 65,425 _05485 H281DRAFT_05486: H281DRAFT_05486 - hypothetical protein, at 65,967 to 66,368 _05486
Group Condition H281DRAFT_05482 H281DRAFT_05483 H281DRAFT_05484 H281DRAFT_05485 H281DRAFT_05486
carbon source Hexanoic (C) -0.3 -0.9 -0.4 -0.6 -0.5
carbon source adipate (C) -0.1 -0.5 -0.0 -0.4 -0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.0 -1.0 -0.2 +0.3 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -1.1 -0.2 +0.1 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.7 -1.0 +0.0 +0.1 -0.2
carbon source butyrate (C) -0.7 -0.4 +0.0 -0.4 -0.0
carbon source succinate (C) -0.1 -0.4 +0.3 -0.3 -0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 -1.0 +0.3 -0.1 +0.2
carbon source propionate (C) +0.1 -0.5 -0.4 +0.3 -0.4
phage Bu1_10 -0.6 -0.6 +0.6 -0.4 +0.1
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 -0.9 -0.2 -0.2 +0.4
carbon source Protocatechuic Acid (C) -0.2 -0.7 +0.6 -0.1 -0.1
carbon source 3-hydroxybutyric (C) -0.2 -0.2 +0.3 +0.2 -0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.0 +0.0 +0.5 -0.3 -0.7
phage Bu1_100 -0.1 +0.0 +0.3 -0.8 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 -0.4 +0.3 -0.1 -0.4
carbon source propionate (C) -0.5 +0.1 +0.7 -0.0 -0.5
carbon source butyrate (C) -0.9 +0.4 +0.3 +0.5 -0.5
carbon source Glycerol (C) -0.4 +0.3 +0.0 -0.3 +0.5
carbon source adipate (C) +0.4 -1.3 +0.2 +0.4 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 +0.7 -0.1 -0.1 -0.6
carbon source Azelaic (C) -0.4 +0.6 +0.4 -0.1 -0.2
carbon source Valeric (C) -0.5 +0.6 -0.0 +0.3 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.2 +0.9 +0.8 -0.6 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 +0.7 +0.4 -0.2 +0.1
carbon source Valeric (C) -0.3 +0.3 -0.3 +0.6 +0.4
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.4 +0.6 +0.1 -0.3 -0.1
carbon source acetate (C) +0.2 +0.7 -0.0 +0.6 -0.4
ecofab LB in EcoFAB_3.5mL +0.7 +0.2 +0.4 +0.1 -0.2
carbon source 2'-Deoxyinosine 10 mM (C) +0.7 -0.1 +0.3 +0.4 +0.0
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