Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05443 and H281DRAFT_05444 are separated by 163 nucleotidesH281DRAFT_05444 and H281DRAFT_05445 are separated by 69 nucleotidesH281DRAFT_05445 and H281DRAFT_05446 are separated by 236 nucleotidesH281DRAFT_05446 and H281DRAFT_05447 are separated by 386 nucleotides H281DRAFT_05443: H281DRAFT_05443 - Transposase, at 23,196 to 23,687 _05443 H281DRAFT_05444: H281DRAFT_05444 - 4-carboxymuconolactone decarboxylase, at 23,851 to 24,411 _05444 H281DRAFT_05445: H281DRAFT_05445 - protein of unknown function (DUF4440), at 24,481 to 24,828 _05445 H281DRAFT_05446: H281DRAFT_05446 - Nitrate/nitrite transporter NarK, at 25,065 to 26,423 _05446 H281DRAFT_05447: H281DRAFT_05447 - hypothetical protein, at 26,810 to 27,532 _05447
Group Condition H281DRAFT_05443 H281DRAFT_05444 H281DRAFT_05445 H281DRAFT_05446 H281DRAFT_05447
carbon source Sebacic (C) N.D. N.D. -1.4 -0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. -0.5 -0.7 N.D.
phage Bu1_10 N.D. N.D. -1.3 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -1.0 +0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.1 -1.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -0.7 -0.2 N.D.
carbon source D-Glucose (C) N.D. N.D. -0.4 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.6 -0.2 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -0.6 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.7 -0.0 N.D.
carbon source Malonic (C) N.D. N.D. -0.9 +0.4 N.D.
carbon source D-Glucose (C) N.D. N.D. -0.6 +0.3 N.D.
carbon source acetate (C) N.D. N.D. -0.5 +0.3 N.D.
carbon source adipate (C) N.D. N.D. -0.4 +0.3 N.D.
carbon source Hexanoic (C) N.D. N.D. -0.2 +0.6 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. +0.6 -0.2 N.D.
carbon source D-Glucose 20 mM (C) N.D. N.D. +0.6 +0.2 N.D.
carbon source adipate (C) N.D. N.D. +0.3 +0.5 N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.6 +0.1 N.D.
carbon source D-Galactose (C) N.D. N.D. +0.7 +0.1 N.D.
phage Bu1_100 N.D. N.D. +0.6 +0.2 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. +0.6 +0.2 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. +0.7 +0.3 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. N.D. +0.7 +0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. +1.1 -0.0 N.D.
carbon source Malonic (C) N.D. N.D. +0.7 +0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. +0.8 +0.3 N.D.
carbon source succinate (C) N.D. N.D. +1.3 +0.0 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.9 +0.6 N.D.
carbon source Hexanoic (C) N.D. N.D. +1.1 +0.5 N.D.
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