Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05432 and H281DRAFT_05433 are separated by 73 nucleotidesH281DRAFT_05433 and H281DRAFT_05434 are separated by 63 nucleotidesH281DRAFT_05434 and H281DRAFT_05435 are separated by 934 nucleotidesH281DRAFT_05435 and H281DRAFT_05436 are separated by 224 nucleotides H281DRAFT_05432: H281DRAFT_05432 - amino acid/amide ABC transporter membrane protein 1, HAAT family, at 8,586 to 9,419 _05432 H281DRAFT_05433: H281DRAFT_05433 - amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-), at 9,493 to 10,656 _05433 H281DRAFT_05434: H281DRAFT_05434 - Predicted amidohydrolase, at 10,720 to 11,616 _05434 H281DRAFT_05435: H281DRAFT_05435 - DNA-binding transcriptional regulator, LysR family, at 12,551 to 13,495 _05435 H281DRAFT_05436: H281DRAFT_05436 - Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family, at 13,720 to 14,712 _05436
Group Condition H281DRAFT_05432 H281DRAFT_05433 H281DRAFT_05434 H281DRAFT_05435 H281DRAFT_05436
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.2 -0.3 +0.0 -1.0 -0.4
phage Bu1_10 -0.9 +0.3 -0.8 +0.4 -0.0
carbon source adipate (C) +0.1 -0.1 -0.3 +0.1 -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 -0.2 -0.4 -0.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.1 -0.6 -0.1 +0.2
carbon source Malonic (C) -0.2 -0.0 +0.4 -0.4 -0.3
carbon source D-Galactose (C) -0.7 -0.1 +0.3 +0.0 +0.1
carbon source Gallic Acid (C) -0.3 +0.2 +0.2 -0.2 -0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.1 -0.1 +0.6 -0.6 -0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.0 +0.0 -0.2 -0.6 +0.5
phage Bu1_100 -0.9 +0.2 +0.4 +0.2 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 -0.2 +0.4 +0.1 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.1 -0.4 -0.3 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.1 -0.0 +0.5 -0.9 +0.3
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 +0.0 +0.5 +0.2 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 -0.4 +0.7 +0.1 -0.0
carbon source 3-hydroxybutyric (C) -0.1 -0.1 +0.6 -0.2 -0.2
carbon source adipate (C) +0.5 +0.0 -0.3 +0.3 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.1 -0.4 -0.1 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 -0.1 +0.8 +0.1 -0.3
carbon source Malonic (C) +0.1 -0.0 +0.8 -0.1 -0.2
phage Bu1_100 -0.2 +0.1 +0.3 +0.6 -0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.1 +0.9 +0.0 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.1 +0.1 +0.3 +0.4
carbon source 3-Hydroxypropionate (C) -0.1 -0.1 +0.9 +0.2 +0.0
carbon source D-Glucose (C) -0.1 +0.1 +0.5 +0.2 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.1 +1.0 +0.2 +0.2
carbon source Valeric (C) +0.1 +0.0 +0.8 +0.3 -0.1
carbon source Hexanoic (C) +0.5 -0.0 +0.9 -0.0 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.1 +0.9 +0.2 +0.4
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