Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_05357 and H281DRAFT_05358 are separated by 409 nucleotidesH281DRAFT_05358 and H281DRAFT_05359 are separated by 75 nucleotidesH281DRAFT_05359 and H281DRAFT_05360 overlap by 4 nucleotidesH281DRAFT_05360 and H281DRAFT_05361 are separated by 121 nucleotides H281DRAFT_05357: H281DRAFT_05357 - ornithine cyclodeaminase, at 109,498 to 110,433 _05357 H281DRAFT_05358: H281DRAFT_05358 - glucose-6-phosphate 1-dehydrogenase, at 110,843 to 112,324 _05358 H281DRAFT_05359: H281DRAFT_05359 - type VI secretion system protein ImpK, at 112,400 to 113,179 _05359 H281DRAFT_05360: H281DRAFT_05360 - type VI secretion system protein ImpJ, at 113,176 to 114,522 _05360 H281DRAFT_05361: H281DRAFT_05361 - type VI secretion system protein VasD, at 114,644 to 115,309 _05361
Group Condition H281DRAFT_05357 H281DRAFT_05358 H281DRAFT_05359 H281DRAFT_05360 H281DRAFT_05361
phage Bu1_100 -1.1 +0.1 -0.2 -0.2 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.2 -0.0 -0.2 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.4 -0.3 -0.2 -0.2 -0.1
phage Bu1_10 -1.1 +0.1 -0.0 +0.0 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) -0.3 -0.1 -0.1 -0.2 -0.2
carbon source D-Glucose 20 mM (C) -0.5 -0.1 -0.2 -0.0 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 +0.1 -0.1 -0.1 +0.1
carbon source D-Glucose 20 mM (C) -0.5 -0.0 -0.2 -0.2 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.3 +0.2 -0.1 -0.4 -0.1
carbon source acetate (C) -0.6 -0.3 +0.2 +0.1 +0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.5 +0.1 -0.1 -0.0 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 +0.3 -0.3 -0.2 -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +0.5 -0.3 -0.4 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.1 +0.1 +0.1 +0.1
carbon source Hexanoic (C) -0.4 +0.1 +0.0 +0.2 +0.1
carbon source propionate (C) -0.4 -0.0 +0.2 +0.3 +0.1
carbon source succinate (C) -0.2 -0.1 +0.2 +0.0 +0.3
carbon source Azelaic (C) -0.4 +0.1 +0.2 +0.2 +0.2
carbon source 3-Hydroxypropionate (C) +0.3 -0.4 +0.2 -0.1 +0.2
carbon source butyrate (C) -0.1 -0.1 +0.1 +0.2 +0.3
carbon source 3-Hydroxypropionate (C) +0.4 -0.3 +0.3 -0.1 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 +0.2 +0.5 -0.1 -0.4
carbon source acetate (C) -0.1 +0.1 +0.1 +0.3 +0.3
ecofab LB in EcoFAB_3.5mL -0.2 +0.1 +0.4 +0.3 +0.3
carbon source Protocatechuic Acid (C) -0.1 +0.2 +0.2 +0.4 +0.3
control NoPhageControl -0.3 +0.0 +0.4 +0.5 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.1 +0.3 +0.1 +0.1
carbon source Malonic (C) +0.2 +0.0 +0.4 +0.2 +0.1
carbon source Protocatechuic Acid (C) -0.0 -0.0 +0.3 +0.4 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +0.2 +0.6 -0.1 +0.0
remove
H281DRAFT_05357
plot
remove
H281DRAFT_05358
plot
remove
H281DRAFT_05359
remove
H281DRAFT_05360
plot
remove
H281DRAFT_05361
plot