Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_05348 and H281DRAFT_05349 are separated by 220 nucleotidesH281DRAFT_05349 and H281DRAFT_05350 overlap by 31 nucleotidesH281DRAFT_05350 and H281DRAFT_05351 are separated by 27 nucleotidesH281DRAFT_05351 and H281DRAFT_05352 are separated by 283 nucleotides H281DRAFT_05348: H281DRAFT_05348 - Hypoxanthine phosphoribosyltransferase, at 100,310 to 101,263 _05348 H281DRAFT_05349: H281DRAFT_05349 - hypothetical protein, at 101,484 to 102,026 _05349 H281DRAFT_05350: H281DRAFT_05350 - Signal transduction histidine kinase, at 101,996 to 103,846 _05350 H281DRAFT_05351: H281DRAFT_05351 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 103,874 to 104,728 _05351 H281DRAFT_05352: H281DRAFT_05352 - serine/threonine-protein kinase HipA, at 105,012 to 106,352 _05352
Group Condition H281DRAFT_05348 H281DRAFT_05349 H281DRAFT_05350 H281DRAFT_05351 H281DRAFT_05352
carbon source adipate (C) N.D. -0.6 -0.0 -3.6 +0.2
carbon source Valeric (C) N.D. +0.2 -0.7 -3.6 +0.2
phage Bu1_100 N.D. -0.7 -0.4 -2.6 +0.1
carbon source Protocatechuic Acid (C) N.D. +0.6 -0.7 -3.3 +0.1
carbon source adipate (C) N.D. -0.2 -0.6 -2.7 +0.3
carbon source succinate (C) N.D. -0.0 -0.6 -2.2 +0.1
carbon source butyrate (C) N.D. +0.3 -0.2 -3.1 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.0 -1.0 -1.2 -0.3
carbon source Protocatechuic Acid (C) N.D. -0.4 -0.7 -1.3 -0.1
control NoPhageControl N.D. -0.2 -0.9 -1.7 +0.3
carbon source L-Glutamic (C) N.D. -0.4 -0.5 -1.4 -0.0
carbon source Hexanoic (C) N.D. -0.6 +0.2 -1.3 -0.6
carbon source Malonic (C) N.D. -0.3 -0.1 -1.8 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.3 -0.6 -2.2 +0.4
carbon source acetate (C) N.D. -0.5 -1.0 -1.1 +0.5
carbon source D-Glucose (C) N.D. -0.1 -0.7 -1.2 +0.2
carbon source Hexanoic (C) N.D. +0.1 -0.3 -1.1 -0.4
carbon source D,L-Lactate (C) N.D. +0.2 -0.1 -1.6 -0.1
carbon source succinate (C) N.D. -0.2 -0.8 -0.8 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. +0.0 +0.2 -1.5 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.6 -0.7 -0.9 -0.1
carbon source acetate (C) N.D. +0.3 -1.0 -0.3 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.4 -0.2 -0.9 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 -0.5 -0.6 +0.7
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.5 +0.5 +0.7 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.3 +0.4 +0.9 +0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.3 +0.5 -0.2 +0.8
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.2 +0.7 +0.9 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.3 +0.9 +0.9 +0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 +1.5 +1.2 -0.2
remove
H281DRAFT_05348
plot		 remove
H281DRAFT_05349
plot		 remove
H281DRAFT_05350		 remove
H281DRAFT_05351
plot		 remove
H281DRAFT_05352
plot