Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05283 and H281DRAFT_05284 are separated by 169 nucleotidesH281DRAFT_05284 and H281DRAFT_05285 are separated by 72 nucleotidesH281DRAFT_05285 and H281DRAFT_05286 are separated by 102 nucleotidesH281DRAFT_05286 and H281DRAFT_05287 are separated by 45 nucleotides H281DRAFT_05283: H281DRAFT_05283 - transcriptional regulator, GntR family, at 25,278 to 26,051 _05283 H281DRAFT_05284: H281DRAFT_05284 - Predicted arabinose efflux permease, MFS family, at 26,221 to 27,519 _05284 H281DRAFT_05285: H281DRAFT_05285 - Threonine/homoserine efflux transporter RhtA, at 27,592 to 28,524 _05285 H281DRAFT_05286: H281DRAFT_05286 - transcriptional regulator, LysR family, at 28,627 to 29,514 _05286 H281DRAFT_05287: H281DRAFT_05287 - porin, OprB family, at 29,560 to 31,119 _05287
Group Condition H281DRAFT_05283 H281DRAFT_05284 H281DRAFT_05285 H281DRAFT_05286 H281DRAFT_05287
carbon source Hydroxy-L-Proline (C) -0.6 -0.3 -0.4 -0.6 -0.3
carbon source Malonic (C) -1.6 +0.2 +0.1 -0.4 +0.0
carbon source Malonic (C) -1.6 -0.2 +0.0 +0.3 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 +0.2 -0.2 -0.9 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.5 +0.0 +0.1 -0.7 -0.5
carbon source acetate (C) -0.3 -0.4 +0.2 -0.6 -0.4
carbon source Protocatechuic Acid (C) -0.3 -0.2 -0.1 -0.8 -0.1
carbon source Malonic (C) -1.4 +0.0 +0.3 -0.3 +0.1
carbon source D-Glucose (C) -0.2 -0.2 -0.2 -0.8 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.0 +0.5 -0.5 -0.2
carbon source adipate (C) +0.2 -0.3 -0.7 +0.3 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.5 +0.3 -0.1 +0.2
carbon source Valeric (C) -0.3 -0.2 -0.5 +0.6 -0.0
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 -0.4 +0.3 -0.4 +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.0 -0.1 +0.6 -0.9 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.2 +0.5 -0.7 +0.1
carbon source Pimelic (C) -0.1 -0.4 -0.3 +0.7 -0.1
carbon source butyrate (C) +0.1 -0.8 -0.2 +0.8 -0.0
carbon source Malonic (C) -1.4 +0.2 -0.1 +1.0 +0.2
carbon source Hexanoic (C) -0.3 -0.3 -0.1 +1.0 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.2 -0.5 +0.2 +0.2 +0.3
carbon source propionate (C) -0.3 -0.1 +0.0 +1.4 -0.4
carbon source Sebacic (C) +0.0 -0.2 -0.5 +1.2 -0.0
carbon source butyrate (C) +0.3 -0.2 +0.2 +1.0 -0.4
carbon source succinate (C) +0.1 -0.4 +0.2 +0.6 +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.1 +0.3 +0.6 +0.4
carbon source Valeric (C) -0.2 -0.2 -0.2 +1.5 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 +0.1 +0.6 +0.4 +0.1
phage Bu1_100 +0.3 +0.2 -0.1 +1.1 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.1 +0.7 +0.9 -0.1
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