Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05257 and H281DRAFT_05258 are separated by 2 nucleotidesH281DRAFT_05258 and H281DRAFT_05259 are separated by 153 nucleotidesH281DRAFT_05259 and H281DRAFT_05260 are separated by 196 nucleotidesH281DRAFT_05260 and H281DRAFT_05261 are separated by 139 nucleotides H281DRAFT_05257: H281DRAFT_05257 - hypothetical protein, at 28 to 81 _05257 H281DRAFT_05258: H281DRAFT_05258 - 5S rRNA. Bacterial TSU, at 84 to 197 _05258 H281DRAFT_05259: H281DRAFT_05259 - transcriptional regulator, LysR family, at 351 to 1,346 _05259 H281DRAFT_05260: H281DRAFT_05260 - Uncharacterized membrane protein YccC, at 1,543 to 3,708 _05260 H281DRAFT_05261: H281DRAFT_05261 - hypothetical protein, at 3,848 to 4,060 _05261
Group Condition H281DRAFT_05257 H281DRAFT_05258 H281DRAFT_05259 H281DRAFT_05260 H281DRAFT_05261
control NoPhageControl N.D. N.D. -0.2 -0.5 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.4 -0.2 N.D.
carbon source Protocatechuic Acid (C) N.D. N.D. -0.3 -0.2 N.D.
carbon source Azelaic (C) N.D. N.D. -0.0 -0.5 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. -0.1 -0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. -0.3 -0.2 N.D.
carbon source Malonic (C) N.D. N.D. -0.1 -0.4 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -0.2 -0.3 N.D.
carbon source Phenylacetic (C) N.D. N.D. -0.0 -0.4 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. -0.1 -0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. -0.1 -0.3 N.D.
carbon source Sebacic (C) N.D. N.D. +0.1 -0.5 N.D.
carbon source Malonic (C) N.D. N.D. +0.0 -0.4 N.D.
carbon source Protocatechuic Acid (C) N.D. N.D. -0.1 -0.3 N.D.
carbon source D-Galactose (C) N.D. N.D. -0.2 -0.2 N.D.
carbon source L-Glutamic (C) N.D. N.D. -0.2 -0.2 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. -0.5 +0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. N.D. -0.3 +0.1 N.D.
carbon source propionate (C) N.D. N.D. +0.2 -0.4 N.D.
carbon source succinate (C) N.D. N.D. +0.1 -0.3 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.3 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. +0.2 -0.2 N.D.
phage Bu1_100 N.D. N.D. +0.3 -0.3 N.D.
carbon source propionate (C) N.D. N.D. +0.4 -0.2 N.D.
lb LB N.D. N.D. +0.2 +0.2 N.D.
carbon source 2-furoic (C) N.D. N.D. +0.4 +0.1 N.D.
carbon source butyrate (C) N.D. N.D. +0.9 +0.3 N.D.
carbon source butyrate (C) N.D. N.D. +0.9 +0.4 N.D.
carbon source propionate (C) N.D. N.D. +2.1 +0.6 N.D.
carbon source propionate (C) N.D. N.D. +2.1 +0.7 N.D.
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