Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05145 and H281DRAFT_05146 are separated by 218 nucleotidesH281DRAFT_05146 and H281DRAFT_05147 are separated by 47 nucleotidesH281DRAFT_05147 and H281DRAFT_05148 are separated by 222 nucleotidesH281DRAFT_05148 and H281DRAFT_05149 are separated by 6 nucleotides H281DRAFT_05145: H281DRAFT_05145 - Low affinity Fe/Cu permease, at 98,432 to 98,929 _05145 H281DRAFT_05146: H281DRAFT_05146 - methyltransferase, TIGR00027 family, at 99,148 to 100,008 _05146 H281DRAFT_05147: H281DRAFT_05147 - chromate transporter, at 100,056 to 101,384 _05147 H281DRAFT_05148: H281DRAFT_05148 - DNA polymerase, at 101,607 to 103,085 _05148 H281DRAFT_05149: H281DRAFT_05149 - putative DNA modification/repair radical SAM protein, at 103,092 to 104,306 _05149
Group Condition H281DRAFT_05145 H281DRAFT_05146 H281DRAFT_05147 H281DRAFT_05148 H281DRAFT_05149
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.2 -0.0 -0.1 -0.1
phage Bu1_100 N.D. -1.4 +0.1 -0.2 -0.0
phage Bu1_10 N.D. -1.3 +0.2 -0.1 +0.1
ecofab LB in EcoFAB_3.5mL N.D. -0.7 -0.1 -0.3 +0.0
phage Bu1_100 N.D. -0.6 -0.0 -0.2 -0.1
carbon source Hexanoic (C) N.D. +0.2 -0.3 -0.0 -0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.8 +0.3 -0.0 +0.1
carbon source acetate (C) N.D. -0.4 -0.3 +0.0 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.6 +0.1 +0.2 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.7 -0.2 +0.2 +0.3
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.8 +0.3 +0.2 +0.1
carbon source adipate (C) N.D. +0.3 -0.4 -0.2 +0.1
carbon source Azelaic (C) N.D. -0.4 +0.1 +0.4 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.5 +0.4 -0.0 +0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 +0.1 +0.3 +0.2
carbon source Sebacic (C) N.D. +0.3 -0.3 +0.3 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.3 -0.2 +0.3 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.8 -0.3 +0.1 -0.4
carbon source Protocatechuic Acid (C) N.D. +0.5 -0.2 +0.2 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.7 -0.1 -0.1 -0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.6 +0.0 -0.2 -0.0
carbon source Protocatechuic Acid (C) N.D. +0.6 -0.2 +0.1 +0.1
carbon source D-Glucose (C) N.D. +0.5 +0.1 -0.1 +0.2
carbon source Glycerol (C) N.D. +0.5 +0.1 -0.2 +0.1
carbon source butyrate (C) N.D. +0.6 +0.0 -0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. +0.7 -0.3 +0.2 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 +0.3 -0.0 -0.1
carbon source Protocatechuic Acid (C) N.D. +0.4 +0.3 +0.2 -0.0
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 +0.1 +0.2 +0.1
carbon source Gallic Acid (C) N.D. +0.7 +0.1 +0.0 +0.1
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