Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05055 and H281DRAFT_05056 are separated by 370 nucleotidesH281DRAFT_05056 and H281DRAFT_05057 are separated by 110 nucleotidesH281DRAFT_05057 and H281DRAFT_05058 are separated by 444 nucleotidesH281DRAFT_05058 and H281DRAFT_05059 are separated by 137 nucleotides H281DRAFT_05055: H281DRAFT_05055 - Signal transduction histidine kinase, at 245,341 to 246,396 _05055 H281DRAFT_05056: H281DRAFT_05056 - aldehyde dehydrogenase (NAD+), at 246,767 to 248,185 _05056 H281DRAFT_05057: H281DRAFT_05057 - DNA-binding transcriptional regulator, LysR family, at 248,296 to 249,195 _05057 H281DRAFT_05058: H281DRAFT_05058 - Predicted secreted hydrolase, at 249,640 to 249,840 _05058 H281DRAFT_05059: H281DRAFT_05059 - 5S rRNA. Bacterial TSU, at 249,978 to 250,077 _05059
Group Condition H281DRAFT_05055 H281DRAFT_05056 H281DRAFT_05057 H281DRAFT_05058 H281DRAFT_05059
ecofab LB in EcoFAB_3.5mL -0.6 -0.1 -0.4 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.4 -0.0 -0.3 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -0.1 -0.2 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.1 -0.5 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.2 -0.3 -0.1 N.D. N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -0.1 -0.1 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -0.2 +0.1 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -0.0 +0.2 N.D. N.D.
phage Bu1_100 -0.5 +0.2 -0.1 N.D. N.D.
carbon source D,L-Lactate (C) -0.3 +0.1 -0.2 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.2 -0.4 N.D. N.D.
carbon source Sebacic (C) +0.3 +0.2 -0.5 N.D. N.D.
carbon source Hexanoic (C) +0.0 +0.5 -0.5 N.D. N.D.
carbon source Valeric (C) +0.3 +0.2 -0.5 N.D. N.D.
carbon source Hydroxy-L-Proline (C) +0.4 -0.2 -0.1 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.2 -0.2 N.D. N.D.
carbon source Phenylacetic (C) +0.5 -0.2 +0.0 N.D. N.D.
carbon source Malonic (C) +0.3 +0.2 -0.2 N.D. N.D.
phage Bu1_100 -0.3 +0.2 +0.5 N.D. N.D.
carbon source adipate (C) -0.2 +0.2 +0.4 N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 -0.0 +0.5 N.D. N.D.
carbon source Phenylacetic (C) +0.4 -0.0 +0.2 N.D. N.D.
phage Bu1_10 +0.1 +0.4 +0.1 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.3 +0.0 +0.3 N.D. N.D.
carbon source D-Glucose (C) +0.4 +0.2 -0.1 N.D. N.D.
carbon source Protocatechuic Acid (C) +0.5 +0.1 +0.2 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.4 +0.0 +0.4 N.D. N.D.
carbon source Valeric (C) +0.2 +0.3 +0.4 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.4 -0.1 +0.8 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +1.5 +0.4 +0.1 N.D. N.D.
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