Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_05053 and H281DRAFT_05054 are separated by 115 nucleotidesH281DRAFT_05054 and H281DRAFT_05055 are separated by 340 nucleotidesH281DRAFT_05055 and H281DRAFT_05056 are separated by 370 nucleotidesH281DRAFT_05056 and H281DRAFT_05057 are separated by 110 nucleotides H281DRAFT_05053: H281DRAFT_05053 - protein of unknown function (DUF3331), at 244,058 to 244,501 _05053 H281DRAFT_05054: H281DRAFT_05054 - Predicted periplasmic or secreted lipoprotein, at 244,617 to 245,000 _05054 H281DRAFT_05055: H281DRAFT_05055 - Signal transduction histidine kinase, at 245,341 to 246,396 _05055 H281DRAFT_05056: H281DRAFT_05056 - aldehyde dehydrogenase (NAD+), at 246,767 to 248,185 _05056 H281DRAFT_05057: H281DRAFT_05057 - DNA-binding transcriptional regulator, LysR family, at 248,296 to 249,195 _05057
Group Condition H281DRAFT_05053 H281DRAFT_05054 H281DRAFT_05055 H281DRAFT_05056 H281DRAFT_05057
ecofab LB in EcoFAB_3.5mL N.D. +0.1 -0.6 -0.1 -0.4
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.3 -0.4 -0.0 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.3 -0.1 -0.1 -0.5
carbon source Azelaic (C) N.D. -1.0 +0.1 +0.1 -0.1
carbon source adipate (C) N.D. -0.8 -0.2 -0.1 +0.3
carbon source propionate (C) N.D. -0.9 +0.2 -0.0 -0.0
phage Bu1_100 N.D. -0.3 -0.5 +0.2 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.3 -0.6 -0.0 +0.2
control NoPhageControl N.D. -0.7 -0.2 +0.1 +0.2
carbon source Hexanoic (C) N.D. -0.8 +0.1 -0.0 +0.4
carbon source Hydroxy-L-Proline (C) N.D. -0.4 +0.4 -0.2 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.3 +0.2 +0.2 -0.4
carbon source Malonic (C) N.D. -0.6 +0.3 +0.2 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.8 +0.3 +0.0 +0.3
carbon source Hexanoic (C) N.D. -0.2 +0.0 +0.5 -0.5
carbon source acetate (C) N.D. -0.7 +0.3 +0.2 -0.0
carbon source Sebacic (C) N.D. +0.0 +0.3 +0.2 -0.5
carbon source D,L-Lactate (C) N.D. +0.4 -0.3 +0.1 -0.2
carbon source Valeric (C) N.D. +0.0 +0.3 +0.2 -0.5
phage Bu1_100 N.D. -0.3 -0.3 +0.2 +0.5
carbon source D-Glucose (C) N.D. -0.4 +0.4 +0.2 -0.1
carbon source Valeric (C) N.D. -0.4 +0.2 +0.3 +0.4
carbon source 2-furoic (C) N.D. +0.6 -0.0 +0.2 -0.2
lb LB N.D. +0.4 -0.1 -0.1 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 -0.0 +0.2 -0.2
carbon source Protocatechuic Acid (C) N.D. -0.2 +0.5 +0.1 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. +1.0 +0.1 -0.0 +0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.4 +0.4 -0.1 +0.8
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 +1.5 +0.4 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.7 +0.4 +0.0 +0.4
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